G759243


Basic Information

Item Value
gene id G759243
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88078702 ~ 88080458 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862756
taggtgtgtccaaacttttgactggtactgtatgtatatatgagTCATATAATACAtacaaacacattttttgtcGAGAGAAAAACCGTTATTATAATACCGGaacataaacataaacataaaGAACACATTTTCTGTCggtttatgtttttgtttattttgcaTATTTACATATAATTTGTTATAATCTGTGTGTAAATACTCTTAACCTATTTTCTTATTCAGTTGAACATATCTTATGTTACTGTTGGTTCCTTTGAAGCTTGAAGTCAGACTACTCACGTGTATTTGtagaataaacaaataaacaaatgttgagacaacaacaacaacaacaaaaatgtttaaaaaaaattactgCTTCCTGTTGGCCGAGGCAGGTGAATCCATGATGTCAGTTACGATGCTCATGTAATGTATTTCTATATGTTGAAATGAATGTTCAACTCTGTAAACGtgtagaagaagagagggaagatagCAACTGAATAACCCTTATGCATACGTGGGAGGAAGTTGTATAACAAATATCAGTCACATAGGCGgctatcccaaatggcatcctattcacatagggaggggggggggtacctggtcagttgtacaactgaatgcattcaccatagggctctggtctaaagtagtgcactatatagggaatagggccccataggactctggcctaaagtagtgcactatgtagggaatagggccccatagggctctggtctaaagtagtgcactatatagggaatatggctctggtctaaagtagtgcactatatagggaatagggtcccataggactctggtctaaagtagtgcactatatatagggttctatagggctctggtctaaagtagtgcactatatatagggttctatagggctctggtctaaagtagtgcactatatatagggttctatagggctctggtctaaagtagtgcactatatatagggttctatagggctctggtctaaagtagtgcactatgtagtgaatagggtgccatttgggatgcagtcgtATTTGCTCTGCATGCCTTTGTAAAAAACAAACACTGTAGCACTTTAGTGCATGTACATACAAGCTACTGCTGTCACTGTGCTCTGTCATGCCGCTGGGATGTAAACACCCGGCTaaggggctctattcaatcccgCATCGCGCAACTTCAgctttacagcgtgattgaaatgtaaatgtttcccGCTTTAACGGAGATTTAACAGACATTCCCCGGGATAAGTGCTGCGTATGTCGGCCCAGCCTTTACATTTATATCGCGGAATGTGTTACACCTtttacagactgaatagagccctaaaggaCCGGGATTTACTCCGATCTTTGTCCGTAACGTTTTAAAAGGTCATGTTTTGCAGAGACTTAATAAAAATAAACTTTAAATTGCTCATCGTCCAAACCCGCGATCGAAAAGAACCACGGTGAGCTATCTTCAACTGTCATTTTGTTGTCACTTAATTTAAAGTAAGGACCATGTTTAAGTAGATGATTGTACTACTATACTGTCCTTGTACAGTTGTTACTATGAGGTAAATATAATTACATGTTTTTCTTTTAAAGAAGAAAAAGCAAgaatgtgggggaaaaaaatgaatGTTTTAAATCAAAGGTCCAAAAAGTGTAAGGATGTAAAGTCAGATGAATTGGTAATAAACATGAATGTTACA
>TU862757
taggtgtgtccaaacttttgactggtactgtatgtatatatgagTCATATAATACAtacaaacacattttttgtcGAGAGAAAAACCGTTATTATAATACCGGaacataaacataaacataaaGAACACATTTTCTGTCggtttatgtttttgtttattttgcaTATTTACATATAATTTGTTATAATCTGTGTGTAAATACTCTTAACCTATTTTCTTATTCAGTTGAACATATCTTATGTTACTGTTGGTTCCTTTGAAGCTTGAAGTCAGACTACTCACGTGTATTTGtagaataaacaaataaacaaatgttgagacaacaacaacaacaacaaaaatgtttaaaaaaaattactgCTTCCTGTTGGCCGAGGCAGGTGAATCCATGATGTCAGTTACGATGCTCATGTAATGTATTTCTATATGTTGAAATGAATGTTCAACTCTGTAAACGtgtagaagaagagagggaagatagCAACTGAATAACCCTTATGCATACGTGGGAGGAAGTTGTATAACAAATATCAGTCACATAGGCGgctatcccaaatggcatcctattcacatagggaggggggggggtacctggtcagttgtacaactgaatgcattcaccatagggctctggtctaaagtagtgcactatatagggaatagggccccataggactctggcctaaagtagtgcactatgtagggaatagggccccatagggctctggtctaaagtagtgcactatatagggaatatggccccataggactctggtctaaagtagtgcactataatagggaatagggccacataggactctggtctaaagtagtgcactatatagggttctatagggctctggtctaaagtagtgcactatgtagtgaatagggtgccatttgggatgcagtcgtATTTGCTCTGCATGCCTTTGTAAAAAACAAACACTGTAGCACTTTAGTGCATGTACATACAAGCTACTGCTGTCACTGTGCTCTGTCATGCCGCTGGGATGTAAACACCCGGCTaaggggctctattcaatcccgCATCGCGCAACTTCAgctttacagcgtgattgaaatgtaaatgtttcccGCTTTAACGGAGATTTAACAGACATTCCCCGGGATAAGTGCTGCGTATGTCGGCCCAGCCTTTACATTTATATCGCGGAATGTGTTACACCTtttacagactgaatagagccctaaaggaCCGGGATTTACTCCGATCTTTGTCCGTAACGTTTTAAAAGGTCATGTTTTGCAGAGACTTAATAAAAATAAACTTTAAATTGCTCATCGTCCAAACCCGCGATCGAAAAGAACCACGGTGAGCTATCTTCAACTGTCATTTTGTTGTCACTTAATTTAAAGTAAGGACCATGTTTAAGTAGATGATTGTACTACTATACTGTCCTTGTACAGTTGTTACTATGAGGTAAATATAATTACATGTTTTTCTTTTAAAGAAGAAAAAGCAAgaatgtgggggaaaaaaatgaatGTTTTAAATCAAAGGTCCAAAAAGTGTAAGGATGTAAAGTCAGATGAATTGGTAATAAACATGAATGTTACA
>TU862758
taggtgtgtccaaacttttgactggtactgtatgtatatatgagTCATATAATACAtacaaacacattttttgtcGAGAGAAAAACCGTTATTATAATACCGGaacataaacataaacataaaGAACACATTTTCTGTCggtttatgtttttgtttattttgcaTATTTACATATAATTTGTTATAATCTGTGTGTAAATACTCTTAACCTATTTTCTTATTCAGTTGAACATATCTTATGTTACTGTTGGTTCCTTTGAAGCTTGAAGTCAGACTACTCACGTGTATTTGtagaataaacaaataaacaaatgttgagacaacaacaacaacaacaaaaatgtttaaaaaaaattactgCTTCCTGTTGGCCGAGGCAGGTGAATCCATGATGTCAGTTACGATGCTCATGTAATGTATTTCTATATGTTGAAATGAATGTTCAACTCTGTAAACGtgtagaagaagagagggaagatagCAACTGAATAACCCTTATGCATACGTGGGAGGAAGTTGTATAACAAATATCAGTCACATAGGCGgctatcccaaatggcatcctattcacatagggaggggggggggtacctggtcagttgtacaactgaatgcattcaccatagggctctggtctaaagtagtgcactatatagggttctatagggctctggtctaaagtagtgcactatgtagtgaatagggtgccatttgggatgcagtcgtATTTGCTCTGCATGCCTTTGTAAAAAACAAACACTGTAGCACTTTAGTGCATGTACATACAAGCTACTGCTGTCACTGTGCTCTGTCATGCCGCTGGGATGTAAACACCCGGCTaaggggctctattcaatcccgCATCGCGCAACTTCAgctttacagcgtgattgaaatgtaaatgtttcccGCTTTAACGGAGATTTAACAGACATTCCCCGGGATAAGTGCTGCGTATGTCGGCCCAGCCTTTACATTTATATCGCGGAATGTGTTACACCTtttacagactgaatagagccctaaaggaCCGGGATTTACTCCGATCTTTGTCCGTAACGTTTTAAAAGGTCATGTTTTGCAGAGACTTAATAAAAATAAACTTTAAATTGCTCATCGTCCAAACCCGCGATCGAAAAGAACCACGGTGAGCTATCTTCAACTGTCATTTTGTTGTCACTTAATTTAAAGTAAGGACCATGTTTAAGTAGATGATTGTACTACTATACTGTCCTTGTACAGTTGTTACTATGAGGTAAATATAATTACATGTTTTTCTTTTAAAGAAGAAAAAGCAAgaatgtgggggaaaaaaatgaatGTTTTAAATCAAAGGTCCAAAAAGTGTAAGGATGTAAAGTCAGATGAATTGGTAATAAACATGAATGTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862756 False 1699 lncRNA 0.38 2 88078702 88080458
TU862757 False 1582 lncRNA 0.38 2 88078702 88080458
TU862758 True 1393 lncRNA 0.37 2 88078702 88080458

Neighbor

gene id symbol gene type direction distance location
LOC110530857 ndufv2 coding downstream 61599 88002853 ~ 88017103 (-)
LOC110531046 ankrd12 coding downstream 77582 87944259 ~ 88001120 (-)
LOC110530858 NA coding downstream 135089 87940808 ~ 87943613 (-)
LOC110530873 LOC106596679 coding downstream 144697 87891226 ~ 87934005 (-)
ralbp1 ralbp1 coding downstream 201957 87849871 ~ 87876745 (-)
LOC110509139 rab12 coding upstream 261997 88342455 ~ 88362306 (-)
LOC110531049 LOC106591876 coding upstream 299479 88379937 ~ 88570992 (-)
LOC110530889 LOC103396682 coding upstream 591007 88671465 ~ 88819127 (-)
LOC110530888 LOC106569654 coding upstream 747613 88827984 ~ 88833229 (-)
pak1ip1 pak1ip1 coding upstream 754099 88834557 ~ 88846601 (-)
G759242 NA non-coding downstream 1720 88076763 ~ 88076982 (-)
G759225 NA non-coding downstream 14051 88060693 ~ 88064651 (-)
G759209 NA non-coding downstream 95590 87982166 ~ 87983112 (-)
G759184 NA non-coding downstream 165272 87906440 ~ 87913430 (-)
G759180 NA non-coding downstream 177527 87900392 ~ 87901175 (-)
G759246 NA non-coding upstream 522 88080980 ~ 88081384 (-)
G759247 NA non-coding upstream 7380 88087838 ~ 88088611 (-)
G759249 NA non-coding upstream 10700 88091158 ~ 88094154 (-)
G759255 NA non-coding upstream 30923 88111381 ~ 88111620 (-)
G759259 NA non-coding upstream 39104 88119562 ~ 88120307 (-)
G757788 NA other downstream 1846510 86230374 ~ 86308150 (-)
G757422 NA other downstream 2214815 85863011 ~ 85863887 (-)
G757292 LOC106569817 other downstream 2323464 85703130 ~ 85756434 (-)
G756981 NA other downstream 2664000 85413431 ~ 85414702 (-)
G759421 NA other upstream 350746 88430998 ~ 88443468 (-)
G759982 NA other upstream 455182 88535640 ~ 88536047 (-)
G759998 NA other upstream 583146 88638913 ~ 88667229 (-)
G760051 NA other upstream 622533 88702991 ~ 88704054 (-)

Expression


Co-expression Network