G759019


Basic Information

Item Value
gene id G759019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88080980 ~ 88081831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862446
tgaattctaaataaataattgacaatgtcaccagcaaagcacccccacaccatcacacctcctcctccatgcttcacggtggtaaccacacatgcagagatcatccgttcaactactctgcgtctcacaaagacacggcggttggacagatttccaccggtctaaagtccattgctcgtgtttcttggcccaagcaagtctcctcttcttattggtgtcctttagcaatggtttctttgcagcaattcgaccacgaaggcctgattcacgcagtctcctctgaacagttgatgttgagatgtgtctgttaactgaactctgtgaagcatttatttggacagcaatctgaggtgcagtgctttgctggtgacactgtctgtgatttaattAGAACTCAAggcactcttaacc
>TU862447
tgaattctaaataaataattgacaatgtcaccagcaaagcacccccacaccatcacacctcctcctccatgcttcacggtggtaaccacacatgcagagatcatccgttcaactactctgcgtctcacaaagacacggcggttggacagatttccaccggtctaaagtccattgctcgtgtttcttggcccaagcaagtctcctcttcttattggtgtcctttagcaatggtttctttgcagcaattcgaccacgaaggcctgattcacgcagtctcctctgaacagttgatgttgagatgtgtctgttaactgaactctgtgaagcatttatttggacagcaatctgaggtgcagtgctttgctggtgacactgtctgtgatttaattAGAACTCAAggcactcttaaccagcatggctaccacagcattctgcagtgatacgccatcccatctggtttgcgcttagtgggactatcgtttgtttttcaacaggacaatgacccaaaacacaccttcaggctatgtaagggctatttgacaaataaggagagtgatggagtgctgcatcagatgacctggcctccacaatcacccgaccgcaacccaattgagatggtttgggatgagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatatgtaggaactccttcaagacttttggaaaagtattccaggtgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaatgcaaagggtggctacaaatatatatttgatatgtttaacacttttttggttactacatgattccatatgtgttatttcattagttttgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862446 False 411 lncRNA 0.46 1 88080980 88081390
TU862447 True 852 lncRNA 0.45 1 88080980 88081831

Neighbor

gene id symbol gene type direction distance location
acss2l LOC106596660 coding upstream 21277 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 305533 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 389237 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 409876 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 531142 87532950 ~ 87549838 (+)
LOC110510807 LOC106569716 coding downstream 543610 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 564569 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 805003 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 992793 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 1013005 89094836 ~ 89113049 (+)
G759018 NA non-coding upstream 512 88078082 ~ 88080468 (+)
G759017 NA non-coding upstream 3383 88077240 ~ 88077597 (+)
G759016 NA non-coding upstream 8889 88071829 ~ 88072091 (+)
G759013 NA non-coding upstream 23382 88055091 ~ 88057598 (+)
G759020 LOC106569827 non-coding downstream 190 88082021 ~ 88106947 (+)
G759055 NA non-coding downstream 87233 88169064 ~ 88175409 (+)
G759064 NA non-coding downstream 139724 88221555 ~ 88224684 (+)
G759080 NA non-coding downstream 169460 88251291 ~ 88251637 (+)
G759085 NA non-coding downstream 182122 88263953 ~ 88264693 (+)
G758988 NA other upstream 85835 87991970 ~ 87995145 (+)
G758976 ankrd12 other upstream 109051 87959523 ~ 87971929 (+)
G758892 NA other upstream 204296 87875120 ~ 87876684 (+)
G758866 NA other upstream 347841 87732294 ~ 87733139 (+)
G758531 NA other upstream 363262 87716817 ~ 87717718 (+)
G759031 LOC106569827 other downstream 27175 88109006 ~ 88110300 (+)
G759556 NA other downstream 616143 88697974 ~ 88701419 (+)
G759598 NA other downstream 779248 88861079 ~ 88861828 (+)

Expression


Co-expression Network