G759064


Basic Information

Item Value
gene id G759064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88221555 ~ 88224684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU862522
gaaacatactgagttatatttctgtggctgtaactgtggaaacatactgaggtGTCTTTGTCTCTTGAGTGGAATAAGATTGTTCTCAACATTTCAGCCACTCCTATGTTTTCATAAACCTCTGAGACATTTTAGAGGGAAATTTCCAAGCGACACCATAAAATTACATCATAAAATGACATCATCAGAAATTATACTACGCCcagagagaaaaatacaaaacttaagagagagagggagagagagagagagagagagagagagagaaagagagagagagagaaagagtatgtGTGCGTTTGTGATGCATTAGTTGACCCATGCGGTTATATCTGTGGGGAGAGCGAGTTTAaggtcattaaatattgtgtggctGAAGGACAGATGGTGCAATTTATATCAATAGACTACATTTAGgtttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctgttatagtagagaggaccagaacagtagtctaatgttatagaagaggtccagaacagtagtctaatgttatagaagagaggaccagagaagtagtctaatgttatagtagagaggaccagaacagtagtcatttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctgatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagtagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccaaaacagtagtctgttatagaagagaggaccagaacagtagtctgttatagaatagaggaccagaacagtagtctgttatagaagagttatagaagagaggaccagaacagtagtctaatgttgtagaagagaggaccagaacagtagtctgatgttatagaagagaggaccagaacagtagtctgttctagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctgttatagaagagaggaccagaacagtagtctgttatagaagagaggaccagaacagtagtctaatgttatagaagaaaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagaaaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagtagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctaatgttatagaagaaaggaccagaacagtagtctaatgttatagaagagaggaccagaacagtagtctgttatagaagagaggaccagaacaggcATGTTTGGGAAAGATTAGGAGAAGTGTTAAAAGAGGCTGATAgcagtgtggtgttgtgtgtgatgattgtgaggagCTATACACGTTTTGACTGAGGATCAGGAGTGGAGCAATAGGAtttatttctttcagcatcttgagagactGTGAATGTGCAGTTAGGGACCGTATGTAAAGGTgctgtctttatcagcatcataacaGCTGATAGTCTTTCAACCACAGTTAGGGACCGTATGTAAAGGTGTTGTCTTTATCAACATCATAACAGCTGATAGTCTTTCAACCACAGTTAGGGACCGTATGTAAAGGTgctgtctttatcagcatcataacaGCTGGCAATATTTCAACCACAGTTAGGGACCGTATGTAAAGGTGttgtctttatcagcatcataacaGCTGGCAATATTTCAACCACATTAAATATACTTCCAAGctgaactgaaatcttatcagaaacatgttgggtggttttcacagctttctatgTCCTTACAACCAGTCAAACTGAtttttctccccggtccctaaaccTCTTTGCTCTGTGAAAGAAGCAGTGATGACAGAGAAAACGTTACCGATATCAACTAGATGGAAACATCCATTCTATCATGTATGACATTATTCTGGAGAGCAGGGGTTTCTTCACTCTTCTGgggcaacatataatgacagtagagaagCTGTATGTATCTCATTATAGACAAGATGACTAACAAATAGTGAACCAAAATGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106611455

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU862522 True 2795 lncRNA 0.39 3 88221555 88224684

Neighbor

gene id symbol gene type direction distance location
acss2l LOC106596660 coding upstream 161852 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 446108 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 529812 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 550451 87569072 ~ 87671104 (+)
LOC110519501 LOC106569361 coding upstream 671717 87532950 ~ 87549838 (+)
LOC110510807 LOC106569716 coding downstream 400757 88625441 ~ 88642762 (+)
LOC110510805 LOC105030507 coding downstream 421716 88646400 ~ 88667320 (+)
LOC118965580 NA coding downstream 662150 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 849940 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 870152 89094836 ~ 89113049 (+)
G759055 NA non-coding upstream 46146 88169064 ~ 88175409 (+)
G759020 LOC106569827 non-coding upstream 133748 88082021 ~ 88106947 (+)
G759019 NA non-coding upstream 139724 88080980 ~ 88081831 (+)
G759018 NA non-coding upstream 141087 88078082 ~ 88080468 (+)
G759017 NA non-coding upstream 143958 88077240 ~ 88077597 (+)
G759080 NA non-coding downstream 26607 88251291 ~ 88251637 (+)
G759085 NA non-coding downstream 39269 88263953 ~ 88264693 (+)
G759089 NA non-coding downstream 51805 88276489 ~ 88277177 (+)
G759091 NA non-coding downstream 58163 88282847 ~ 88283987 (+)
G759098 NA non-coding downstream 73239 88297923 ~ 88301084 (+)
G759031 LOC106569827 other upstream 111255 88109006 ~ 88110300 (+)
G758988 NA other upstream 226410 87991970 ~ 87995145 (+)
G758976 ankrd12 other upstream 249626 87959523 ~ 87971929 (+)
G758892 NA other upstream 344871 87875120 ~ 87876684 (+)
G759556 NA other downstream 473290 88697974 ~ 88701419 (+)
G759598 NA other downstream 636395 88861079 ~ 88861828 (+)
LOC118965583 LOC106569839 other downstream 1343319 89560138 ~ 89659347 (+)
G759892 NA other downstream 1471736 89696420 ~ 89696907 (+)

Expression


Co-expression Network