XLOC_002654 (smad2)


Basic Information

Item Value
gene id XLOC_002654
gene name smad2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 14871136 ~ 14943281 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004930
ATAAGATTAGGTTGCGCGCATTGGAGGCCGTCGTCTGCTGCTGTAATTCGGCTACAGTGGGAaggaaaatattgttttaaaacgaCTTTTACCCACTCGCGAATAATCAGTTTCGCACGGATTTTACGCCACCGCTTTATTACGGAGAACGCTTTTCGTAGGAAGGGTAGACCGGGACAGGGAGTCGATTAGCGGCCCATGCAGCCTTAACGAGCCCGTGAGACACCATCAAATCACCGAAGAAGGTAACCCCTCACCCCCCTTTCCTCTCCTGTTTCCTAAACATCTATGCCCCCTGCCCCCTCATAATCAGCCCAGAGACCCAGTTAGGAACTTTGGGTCTGTTCCTCCCCATTCTCCTAGCCTCCATCTGTCTCTCTAACTCCACCTGCCCAGACTGACCGCTCATCGGACaccccaagaaaaaaaaaaacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAGTGTGTCACCATTCCCAGCAATTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGAACAGTGGGATACCTCAGGCCTTTACAGCTACCCTGACCAAACCAGATCTCTGGACGGGCGTTTGCAAGTGTCTCACCGTAAAGGTCTGCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCATCACGAGCTGCGCGCCATCGAGACCTGCGAGTATGCTTTCAACCTCAAGAAGGATGAAGTCTGCGTCAATCCCTACCACTACCAGCGGGTGGAGACACCAGTTCTTCCTCCTGTTCTCGTGCCAAGACACACGGAGATCCTGACTGAGTTGCCACCTTTGGACGACTACACCAACTCCATACCTGAAAACACCAACTTCCCAACAGGGATCGAGCCCCCCAACAATTACATACCAGAAACTCCTCCACCGGGATACATCAGTGAGGATGGGGAGGCCAGTGACCAGCAAATGAATCAAAGTATGGACACAGGTTCTCCTGCAGAACTGTCACCAAGCACACTCTCGCCTGTCAATCATGGCATGGACCTGCAGCCAGTGACTTACTCAGAGCCTGCGTTTTGGTGCTCCATAGCTTACTATGAACTTAACCAGCGGGTTGGAGAAACATTCCACGCCTCTCAGCCTTCCCTCACCGTGGACGGCTTCACAGACCCCTCCAATTCAGAGCGATTCTGCCTGGGCTTGCTGTCCAACGTCAACCGCAACGCCACCGTCGAGATGACCCGAAGACATATAGGACGAGGAGTCAGGCTGTATTATATTGGTGGGGAAGTGTTTGCTGAATGTCTTAGCGATAGCGCCATCTTTGTTCAGAGCCCGAACTGTAATCAGAGGTATGGCTGGCATCCTGCAACAGTCTGTAAAATCCCCCCAGGCTGTAACCTGAAGATCTTCAACAACCAGGAGTTTGCAGCATTGCTGGCTCAGTCGGTGAACCAGGGGTTCGAGGCTGTTTATCAGTTGACCAGGATGTGCACCATTCGCATGAGTTTTGTCAAAGGCTGGGGAGCAGAGTACAGACGGCAGACAGTGACGAGCACCCCCTGCTGGATCGAGCTGCATCTGAACGGGCCCCTCCAGTGGCTGGACAAGGTTCTGACCCAGATGGGCTCTCCCTCCGTACGCTGCTCCAGTATGTCCTAAACCCAGCTCTCTGTACTCTGCCCACCCCAAAACAATCACATCAAGCGACAACTCGAAGAACAACAGACTTACGATGCCCCCCTCGCTCCTTTCTCTTTCATAGTACTCGTGAGCCTTTCTTCTATCCTCTTCTCTATCCTCTCGACACTGATGTTCGGACCCGAACGCAGCACTTGCTGTCTCATCAGCTTCATGCACCTTtgattctctcttgttttctTTCATAAACCCTcaatattaaatgtattagtaGTAGAATTTGAAATGTATATtggtttttatttgatttttacgGTTTTCGAGAAGGAGGGAAGGTGCGTATGTTGTGTGGAAGTTCAAGAAGGCAGTACATGACTTCACACACACGTGTAGCAGTAAGGCTTTCTCCCCCCCACCCCGATGAAGTAAATACTCGGATACGAACGACGCCGGTGCTCCCAATCCGCTCGTTCAAGGAGGTTACTTTTTCTGGCAAAAAGTTacgttcttttttttattttatacacgtTATAATTGTGTAGATTGACGCGGTAAGACTTAATCATGGTTTTCAATTTTCTTCAGCAATGCCAAAAGacactttttattttgctttattttttattttgaaccaTTTCTTCCCccaaaccactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaataaataaaagaatgttgCCTTTGATTTGAGGTATGCTGCTGTAAGACATGCTTCTTTTATTCGAACTGATAGGAATGTTTAACGAGAAACGTTTAATTCGATCCTTCGGAATTAGCTATTTATTCACTGGGTGAAATCTCCGCTAGCCGTGGAGTGTTTTCGGAGTCTGGCTTCCTCAGAAAGTGGCTTTTAAGGATGAACGAAATTTCTTATTGTCTCGCGCAATACAAATCTttcaacaaaatataataaacaaacaaatccaaGTATTTAAGCTTTAAGTGTTAATAAACTAGGTTATCCTTCACACAATTACAAGATTGTTTTTCCCTTTATCTTTCTTTTAGCTACTTTTTgtattttcatgtatttttatatataaatatatttaagatcTTTAAAGCTCTCTTCCTTTTTATTagaattgaatatttttttagatcATGCCCTCTTTTTAAAGGAACATGGCTTCATAATGAAATGTCCTATCATACGAAAATCATTATTTAGCATGAAATTTTTATAAGCGCAAATATCTTTTTGCTCCTCTTCCTCCGCTTTTTTCACGGTTACCGTTTCGCCCTGATCTCGATCCCTCTGAAATGcatctgattttcttttttaagttgCTTCGTTCACAATACTGTATAACCTACCTCCCCTTAAAAGTACAGTTACCAAAATGGGAAATTCAGCCTACGGTAACATTGCGGGTTTTATTTGTTtgcaattggggaaaaaaaaatcgaaaaaaaGACTTCCAAACAGGTTGCTTTTACAGGGAGAACTGTGCAACTTTAGTGTGCGTGCTCGTTGTACAACTTTTACTAATGACTGTGATATAGCTGTCTGTTATTCTTTACTTGTTGTGGCAGTGACCAGGCGTTGCAAATATTCATTCCCTTCTTTCCACCTTTGTCTCCGTATTTTCCTTCATCCATCTTTACTACTCTTGCGATTGTACTTTAAGTgcatctagaaaaaaaaaagctgacaaaGATGTTGTGGCCCATTTTTAAAGCCGATAAGTGGCCAATAAGACACTGGGAACATTCTgtttgccattattattattatttttttgactgaGTGTGGAAAGAAAACCAAATAGAACTGAAAGTGGACCAGACATATAtgcatataaatgtgtatatataattttattttacttttttttctgttatttttttctccttttttttttgcaaagcatTTAACAGTTGGTGAGCTTGTTTTACCATTAGAGAGATGTATTGGTAGGACGTGAACTTCAGGCGATAAGCTTTTCAGGCGTGTTGCATATGCAGACTTCATAAATACActaataaaagttttaattctcatgttaa
>TCONS_00004929
ATAAGATTAGGTTGCGCGCATTGGAGGCCGTCGTCTGCTGCTGTAATTCGGCTACAGTGGGAaggaaaatattgttttaaaacgaCTTTTACCCACTCGCGAATAATCAGTTTCGCACGGATTTTACGCCACCGCTTTATTACGGAGAACGCTTTTCGTAGGAAGGGTAACCCCTCACCCCCCTTTCCTCTCCTGTTTCCTAAACATCTATGCCCCCTGCCCCCTCATAATCAGCCCAGAGACCCAGTTAGGAACTTTGGGTCTGTTCCTCCCCATTCTCCTAGCCTCCATCTGTCTCTCTAACTCCACCTGCCCAGACTGACCGCTCATCGGACaccccaagaaaaaaaaaaacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAGTGTGTCACCATTCCCAGCAATTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGAACAGTGGGATACCTCAGGCCTTTACAGCTACCCTGACCAAACCAGATCTCTGGACGGGCGTTTGCAAGTGTCTCACCGTAAAGGTCTGCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCATCACGAGCTGCGCGCCATCGAGACCTGCGAGTATGCTTTCAACCTCAAGAAGGATGAAGTCTGCGTCAATCCCTACCACTACCAGCGGGTGGAGACACCAGTTCTTCCTCCTGTTCTCGTGCCAAGACACACGGAGATCCTGACTGAGTTGCCACCTTTGGACGACTACACCAACTCCATACCTGAAAACACCAACTTCCCAACAGGGATCGAGCCCCCCAACAATTACATACCAGAAACTCCTCCACCGGGATACATCAGTGAGGATGGGGAGGCCAGTGACCAGCAAATGAATCAAAGTATGGACACAGGTTCTCCTGCAGAACTGTCACCAAGCACACTCTCGCCTGTCAATCATGGCATGGACCTGCAGCCAGTGACTTACTCAGAGCCTGCGTTTTGGTGCTCCATAGCTTACTATGAACTTAACCAGCGGGTTGGAGAAACATTCCACGCCTCTCAGCCTTCCCTCACCGTGGACGGCTTCACAGACCCCTCCAATTCAGAGCGATTCTGCCTGGGCTTGCTGTCCAACGTCAACCGCAACGCCACCGTCGAGATGACCCGAAGACATATAGGACGAGGAGTCAGGCTGTATTATATTGGTGGGGAAGTGTTTGCTGAATGTCTTAGCGATAGCGCCATCTTTGTTCAGAGCCCGAACTGTAATCAGAGGTATGGCTGGCATCCTGCAACAGTCTGTAAAATCCCCCCAGGCTGTAACCTGAAGATCTTCAACAACCAGGAGTTTGCAGCATTGCTGGCTCAGTCGGTGAACCAGGGGTTCGAGGCTGTTTATCAGTTGACCAGGATGTGCACCATTCGCATGAGTTTTGTCAAAGGCTGGGGAGCAGAGTACAGACGGCAGACAGTGACGAGCACCCCCTGCTGGATCGAGCTGCATCTGAACGGGCCCCTCCAGTGGCTGGACAAGGTTCTGACCCAGATGGGCTCTCCCTCCGTACGCTGCTCCAGTATGTCCTAAACCCAGCTCTCTGTACTCTGCCCACCCCAAAACAATCACATCAAGCGACAACTCGAAGAACAACAGACTTACGATGCCCCCCTCGCTCCTTTCTCTTTCATAGTACTCGTGAGCCTTTCTTCTATCCTCTTCTCTATCCTCTCGACACTGATGTTCGGACCCGAACGCAGCACTTGCTGTCTCATCAGCTTCATGCACCTTtgattctctcttgttttctTTCATAAACCCTcaatattaaatgtattagtaGTAGAATTTGAAATGTATATtggtttttatttgatttttacgGTTTTCGAGAAGGAGGGAAGGTGCGTATGTTGTGTGGAAGTTCAAGAAGGCAGTACATGACTTCACACACACGTGTAGCAGTAAGGCTTTCTCCCCCCCACCCCGATGAAGTAAATACTCGGATACGAACGACGCCGGTGCTCCCAATCCGCTCGTTCAAGGAGGTTACTTTTTCTGGCAAAAAGTTacgttcttttttttattttatacacgtTATAATTGTGTAGATTGACGCGGTAAGACTTAATCATGGTTTTCAATTTTCTTCAGCAATGCCAAAAGacactttttattttgctttattttttattttgaaccaTTTCTTCCCccaaaccactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaataaataaaagaatgttgCCTTTGATTTGAGGTATGCTGCTGTAAGACATGCTTCTTTTATTCGAACTGATAGGAATGTTTAACGAGAAACGTTTAATTCGATCCTTCGGAATTAGCTATTTATTCACTGGGTGAAATCTCCGCTAGCCGTGGAGTGTTTTCGGAGTCTGGCTTCCTCAGAAAGTGGCTTTTAAGGATGAACGAAATTTCTTATTGTCTCGCGCAATACAAATCTttcaacaaaatataataaacaaacaaatccaaGTATTTAAGCTTTAAGTGTTAATAAACTAGGTTATCCTTCACACAATTACAAGATTGTTTTTCCCTTTATCTTTCTTTTAGCTACTTTTTgtattttcatgtatttttatatataaatatatttaagatcTTTAAAGCTCTCTTCCTTTTTATTagaattgaatatttttttagatcATGCCCTCTTTTTAAAGGAACATGGCTTCATAATGAAATGTCCTATCATACGAAAATCATTATTTAGCATGAAATTTTTATAAGCGCAAATATCTTTTTGCTCCTCTTCCTCCGCTTTTTTCACGGTTACCGTTTCGCCCTGATCTCGATCCCTCTGAAATGcatctgattttcttttttaagttgCTTCGTTCACAATACTGTATAACCTACCTCCCCTTAAAAGTACAGTTACCAAAATGGGAAATTCAGCCTACGGTAACATTGCGGGTTTTATTTGTTtgcaattggggaaaaaaaaatcgaaaaaaaGACTTCCAAACAGGTTGCTTTTACAGGGAGAACTGTGCAACTTTAGTGTGCGTGCTCGTTGTACAACTTTTACTAATGACTGTGATATAGCTGTCTGTTATTCTTTACTTGTTGTGGCAGTGACCAGGCGTTGCAAATATTCATTCCCTTCTTTCCACCTTTGTCTCCGTATTTTCCTTCATCCATCTTTACTACTCTTGCGATTGTACTTTAAGTgcatctagaaaaaaaaaagctgacaaaGATGTTGTGGCCCATTTTTAAAGCCGATAAGTGGCCAATAAGACACTGGGAACATTCTgtttgccattattattattatttttttgactgaGTGTGGAAAGAAAACCAAATAGAACTGAAAGTGGACCAGACATATAtgcatataaatgtgtatatataattttattttacttttttttctgttatttttttctccttttttttttgcaaagcatTTAACAGTTGGTGAGCTTGTTTTACCATTAGAGAGATGTATTGGTAGGACGTGAACTTCAGGCGATAAGCTTTTCAGGCGTGTTGCATATGCAGACTTCATAAATACActaataaaagttttaattctcatgttaa
>TCONS_00004931
GTCGTCTGCTGCTGTAATTCGGCTACAGTGGGAaggaaaatattgttttaaaacgaCTTTTACCCACTCGCGAATAATCAGTTTCGCACGGATTTTACGCCACCGCTTTATTACGGAGAACGCTTTTCGTAGGAAGGGTAACCCCTCACCCCCCTTTCCTCTCCTGTTTCCTAAACATCTATGCCCCCTGCCCCCTCATAATCAGCCCAGAGACCCAGTTAGGAACTTTGGGTCTGTTCCTCCCCATTCTCCTAGCCTCCATCTGTCTCTCTAACTCCACCTGCCCAGACTGACCGCTCATCGGACaccccaagaaaaaaaaaaacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAGTGTGTCACCATTCCCAGCAATTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGAACAGTGGGATACCTCAGGCCTTTACAGCTACCCTGACCAAACCAGATCTCTGGACGGGCGTTTGCAAGTGTCTCACCGTAAAGGTCTGCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCATCACGAGCTGCGCGCCATCGAGACCTGCGAGTATGCTTTCAACCTCAAGAAGGATGAAGTCTGCGTCAATCCCTACCACTACCAGCGGGTGGAGACACCAGTTCTTCCTCCTGTTCTCGTGCCAAGACACACGGAGATCCTGACTGAGTTGCCACCTTTGGACGACTACACCAACTCCATACCTGAAAACACCAACTTCCCAACAGGGATCGAGCCCCCCAACAATTACATACCAGAAACTCCTCCACCGGGATACATCAGTGAGGATGGGGAGGCCAGTGACCAGCAAATGAATCAAAGTATGGACACAGGTTCTCCTGCAGAACTGTCACCAAGCACACTCTCGCCTGTCAATCATGGCATGGACCTGCAGCCAGTGACTTACTCAGAGCCTGCGTTTTGGTGCTCCATAGCTTACTATGAACTTAACCAGCGGGTTGGAGAAACATTCCACGCCTCTCAGCCTTCCCTCACCGTGGACGGCTTCACAGACCCCTCCAATTCAGAGCGATTCTGCCTGGGCTTGCTGTCCAACGTCAACCGCAACGCCACCGTCGAGATGACCCGAAGACATATAGGACGAGGAGTCAGGCTGTATTATATTGGTGGGGAAGTGTTTGCTGAATGTCTTAGCGATAGCGCCATCTTTGTTCAGAGCCCGAACTGTAATCAGAGGTATGGCTGGCATCCTGCAACAGTCTGTAAAATCCCCCCAGGCTGTAACCTGAAGATCTTCAACAACCAGGAGTTTGCAGCATTGCTGGCTCAGTCGGTGAACCAGGGGTTCGAGGCTGTTTATCAGTTGACCAGGATGTGCACCATTCGCATGAGTTTTGTCAAAGGCTGGGGAGCAGAGTACAGcaGACGGCAGACAGTGACGAGCACCCCCTGCTGGATCGAGCTGCATCTGAACGGGCCCCTCCAGTGGCTGGACAAGGTTCTGACCCAGATGGGCTCTCCCTCCGTACGCTGCTCCAGTATGTCCTAAACCCAGCTCTCTGTACTCTGCCCACCCCAAAACAATCACATCAAGCGACAACTCGAAGAACAACAGACTTACGATGCCCCCCTCGCTCCTTTCTCTTTCATAGTACTCGTGAGCCTTTCTTCTATCCTCTTCTCTATCCTCTCGACACTGATGTTCGGACCCGAACGCAGCACTTGCTGTCTCATCAGCTTCATGCACCTTtgattctctcttgttttctTTCATAAACCCTcaatattaaatgtattagtaGTAGAA
>TCONS_00004932
CGCGGATCGCGTTGCGTGCAATAAGATTAGGTTGCGCGCATTGGAGGCCGTCGTCTGCTGCTGTAATTCGGCTACAGTGGGAaggaaaatattgttttaaaacgaCTTTTACCCACTCGCGAATAATCAGTTTCGCACGGATTTTACGCCACCGCTTTATTACGGAGAACGCTTTTCGTAGGAAGGGTAGACCGGGACAGGGAGTCGATTAGCGGCCCATGCAGCCTTAACGAGCCCGTGAGACACCATCAAATCACCGAAGAAGGTAACCCCTCACCCCCCTTTCCTCTCCTGTTTCCTAAACATCTATGCCCCCTGCCCCCTCATAATCAGCCCAGAGACCCAGTTAGGAACTTTGGGTCTGTTCCTCCCCATTCTCCTAGCCTCCATCTGTCTCTCTAACTCCACCTGCCCAGACTGACCGCTCATCGGACaccccaagaaaaaaaaaaacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAGTGTGTCACCATTCCCAGCAATTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGAACAGTGGGATACCTCAGGCCTTTACAGCTACCCTGACCAAACCAGATCTCTGGACGGGCGTTTGCAAGTGTCTCACCGTAAAGGTCTGCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCATCACGAGCTGCGCGCCATCGAGACCTGCGAGTATGCTTTCAACCTCAAGAAGGATGAAGTCTGCGTCAATCCCTACCACTACCAGCGGGTGGAGACACCAGTTCTTCCTCCTGTTCTCGTGCCAAGACACACGGAGATCCTGACTGAGTTGCCACCTTTGGACGACTACACCAACTCCATACCTGAAAACACCAACTTCCCAACAGGGATCGAGCCCCCCAACAATTACATACCAGAAACTCCTCCACCGGGATACATCAGTGAGGATGGGGAGGCCAGTGACCAGCAAATGAATCAAAGTATGGACACAGGTTCTCCTGCAGAACTGTCACCAAGCACACTCTCGCCTGTCAATCATGGCATGGACCTGCAGCCAGTGACTTACTCAGAGCCTGCGTTTTGGTGCTCCATAGCTTACTATGAACTTAACCAGCGGGTTGGAGAAACATTCCACGCCTCTCAGCCTTCCCTCACCGTGGACGGCTTCACAGACCCCTCCAATTCAGAGCGATTCTGCCTGGGCTTGCTGTCCAACGTCAACCGCAACGCCACCGTCGAGATGACCCGAAGACATATAGGACGAGGAGTCAGGCTGTATTATATTGGTGGGGAAGTGTTTGCTGAATGTCTTAGCGATAGCGCCATCTTTGTTCAGAGCCCGAACTGTAATCAGAGGTATGGCTGGCATCCTGCAACAGTCTGTAAAATCCCCCCAGGCTGTAACCTGAAGATCTTCAACAACCAGGAGTTTGCAGCATTGCTGGCTCAGTCGGTGAACCAGGGGTTCGAGGCTGTTTATCAGTTGACCAGGATGTGCACCATTCGCATGAGTTTTGTCAAAGGCTGGGGAGCAGAGTACAGcaGACGGCAGACAGTGACGAGCACCCCCTGCTGGATCGAGCTGCATCTGAACGGGCCCCTCCAGTGGCTGGACAAGGTTCTGACCCAGATGGGCTCTCCCTCCGTACGCTGCTCCAGTATGTCCTAAACCCAGCTCTCTGTACTCTGCCCACCCCAAAACAATCACATCAAGCGACAACTCGAAGAACAACAGACTTACGATGCCCCCCTCG
>TCONS_00004933
aacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAGTGTGTCACCATTCCCAGCAATTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGAACAGTGGGATACCTCAGGCCTTTACAGCTACCCTGACCAAACCAGATCTCTGGACGGGCGTTTGCAAGTGTCTCACCGTAAAGGTCTGCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCATCACGAGCTGCGCGCCATCGAGACCTGCGAGTATGCTTTCAACCTCAAGAAGGATGAAGTCTGCGTCAATCCCTACCACTACCAGCGGGTGGAGACACCAGTTCTTCCTCCTGTTCTCGTGCCAAGACACACGGAGATCCTGACTGAGTTGCCACCTTTGGACGACTACACCAACTCCATACCTGAAAACACCAACTTCCCAACAGGGATCGAGCCCCCCAACAATTACATACCAGAAACTCCTCCACCGGGATACATCAGTGAGGATGGGGAGGCCAGTGACCAGCAAATGAATCAAAGTATGGACACAGGTTCTCCTGCAGAACTGTCACCAAGCACACTCTCGCCTGTCAATCATGGCATGGACCTGCAGCCAGTGACTTACTCAGAGCCTGCGTTTTGGTGCTCCATAGCTTACTATGAACTTAACCAGCGGGTTGGAGAAACATTCCACGCCTCTCAGCCTTCCCTCACCGTGGACGGCTTCACAGACCCCTCCAATTCAGAGCGATTCTGCCTGGGCTTGCTGTCCAACGTCAACCGCAACGCCACCGTCGAGATGACCCGAAGACATATAGGACGAGGAGTCAGGCTGTATTATATTGGTGGGGAAGTGTTTGCTGAATGTCTTAGCGATAGCGCCATCTTTGTTCAGAGCCCGAACTGTAATCAGAGGTATGGCTGGCATCCTGCAACAGTCTGTAAAATCCCCCCAGGCTGTAACCTGAAGATCTTCAACAACCAGGAGTTTGCAGCATTGCTGGCTCAGTCGGTGAACCAGGGGTTCGAGGCTGTTTATCAGTTGACCAGGATGTGCACCATTCGCATGAGTTTTGTCAAAGGCTGGGGAGCAGAGTACAGACGGCAGACAGTGACGAGCACCCCCTGCTGGATCGAGCTGCATCTGAACGGGCCCCTCCAGTGGCTGGACAAGGTTCTGACCCAGATGGGCTCTCCCTCCGTACGCTGCTCCAGTATGTCCTAAACCCAG
>TCONS_00004934
CAAGCTCCATCATCACACTGCCACTGATTCCTGCTGCAGCCTCCATCAACACCTGAGAGCACAGGTAGACCGGGACAGGGAGTCGATTAGCGGCCCATGCAGCCTTAACGAGCCCGTGAGACACCATCAAATCACCGAAGAAGGTAACCCCTCACCCCCCTTTCCTCTCCTGTTTCCTAAACATCTATGCCCCCTGCCCCCTCATAATCAGCCCAGAGACCCAGTTAGGAACTTTGGGTCTGTTCCTCCCCATTCTCCTAGCCTCCATCTGTCTCTCTAACTCCACCTGCCCAGACTGACCGCTCATCGGACaccccaagaaaaaaaaaaacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAGTGTGTCACCATTCCCAGCAATTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGAACAGTGGGATACCTCAGGCCTTTACAGCTACCCTGACCAAACCAGATCTCTGGACGGGCGTTTGCAAGTGTCTCACCGTAAAGGTCTGCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCATCACGAGCTGCGCGCCATCGAGACCTGCGAGTATGCTTTCAACCTCAAGAAGGATGAA
>TCONS_00004935
CACAAAATCAATGGTCACACAAACTCGCATCAGCAGGCAAATTTCGACTTCTCGCTTTTGCATAGATGAACCGGGACAGGGAGTCGATTAGCGGCCCATGCAGCCTTAACGAGCCCGTGAGACACCATCAAATCACCGAAGAAGGTAACCCCTCACCCCCCTTTCCTCTCCTGTTTCCTAAACATCTATGCCCCCTGCCCCCTCATAATCAGCCCAGAGACCCAGTTAGGAACTTTGGGTCTGTTCCTCCCCATTCTCCTAGCCTCCATCTGTCTCTCTAACTCCACCTGCCCAGACTGACCGCTCATCGGACaccccaagaaaaaaaaaaacatgtcctcCATCTTGCCTTTCACTCCGCCCGTGGTGAAACGTCTGCTGGGTTGGAAGAAGTCTGCTAGTGGTTCAAGCGGAGCAGGAGGTGGTGGAGAGCAAAACGGCCAGGAGGAGAAGTGGTGCGAGAAGGCAGTCAAAAGCCTGGTAAAGAAGTTGAAGAAAACTGGCCAACTGGACGAGCTGGAGAAGGCCATCACCACACAAAACCGCAACACCAAG

Function

symbol description
smad2 Enables DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in embryonic pattern specification and intracellular signal transduction. Acts upstream of with a positive effect on nodal signaling pathway. Acts upstream of or within negative regulation of transcription by RNA polymerase II; neural plate anterior/posterior regionalization; and positive regulation of oocyte development. Located in chromatin and nucleus. Is expressed in brain; head; immature eye; and tail bud. Human ortholog(s) of this gene implicated in Lynch syndrome; cervical cancer; and ovarian cancer. Orthologous to human SMAD2 (SMAD family member 2).

GO:

id name namespace
GO:0007179 transforming growth factor beta receptor signaling pathway biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0030154 cell differentiation biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0060395 SMAD protein signal transduction biological_process
GO:0009880 embryonic pattern specification biological_process
GO:0007275 multicellular organism development biological_process
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0030509 BMP signaling pathway biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0060282 positive regulation of oocyte development biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0021999 neural plate anterior/posterior regionalization biological_process
GO:0071144 heteromeric SMAD protein complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0008134 transcription factor binding molecular_function
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific molecular_function
GO:0005515 protein binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function
GO:0031625 ubiquitin protein ligase binding molecular_function
GO:0070411 I-SMAD binding molecular_function

KEGG:

id description
ko04350 TGF-beta signaling pathway
ko04390 Hippo signaling pathway
ko04371 Apelin signaling pathway
ko04144 Endocytosis
ko04110 Cell cycle
ko04218 Cellular senescence
ko04550 Signaling pathways regulating pluripotency of stem cells
ko04659 Th17 cell differentiation
ko04926 Relaxin signaling pathway
ko05200 Pathways in cancer
ko05205 Proteoglycans in cancer
ko05210 Colorectal cancer
ko05212 Pancreatic cancer
ko05225 Hepatocellular carcinoma
ko05226 Gastric cancer
ko05166 Human T-cell leukemia virus 1 infection
ko05142 Chagas disease
ko05321 Inflammatory bowel disease
ko05415 Diabetic cardiomyopathy
ko04933 AGE-RAGE signaling pathway in diabetic complications

ZFIN:

id description
ZDB-GENE-990603-7 Enables DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in embryonic pattern specification and intracellular signal transduction. Acts upstream of with a positive effect on nodal signaling pathway. Acts upstream of or within negative regulation of transcription by RNA polymerase II; neural plate anterior/posterior regionalization; and positive regulation of oocyte development. Located in chromatin and nucleus. Is expressed in brain; head; immature eye; and tail bud. Human ortholog(s) of this gene implicated in Lynch syndrome; cervical cancer; and ovarian cancer. Orthologous to human SMAD2 (SMAD family member 2).

Ensembl:

ensembl_id ENSDARG00000006389

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004930 False 3895 mRNA 0.43 12 14871136 14929659
TCONS_00004929 False 3816 mRNA 0.43 11 14871136 14929659
TCONS_00004931 False 1994 mRNA 0.52 11 14872932 14929630
TCONS_00004932 False 1949 mRNA 0.53 12 14873105 14929679
TCONS_00004933 False 1416 mRNA 0.54 10 14873184 14920989
TCONS_00004934 False 812 mRNA 0.54 5 14894653 14943281
TCONS_00004935 True 555 mRNA 0.53 3 14920765 14929392

Neighbor

gene id symbol gene type direction distance location
XLOC_002653 CT027820.1 coding downstream 138737 14732283 ~ 14732399 (-)
XLOC_002652 skor2 coding downstream 314158 14547941 ~ 14556978 (-)
XLOC_002651 ier3ip1 coding downstream 325478 14542726 ~ 14545658 (-)
XLOC_002650 hdhd2 coding downstream 330693 14525184 ~ 14540443 (-)
XLOC_002649 galt coding downstream 382618 14263684 ~ 14488518 (-)
XLOC_002656 NA coding upstream 87725 15031006 ~ 15042748 (-)
XLOC_002657 NA coding upstream 89691 15032972 ~ 15034960 (-)
XLOC_002658 cldn23a coding upstream 103556 15046837 ~ 15048781 (-)
XLOC_002659 cldn23b coding upstream 107188 15050469 ~ 15053614 (-)
XLOC_002660 CT027832.1 coding upstream 139129 15082410 ~ 15086297 (-)
XLOC_002648 BX000705.1 non-coding downstream 939440 13931569 ~ 13931696 (-)
XLOC_002647 BX293994.1 non-coding downstream 1258888 13612133 ~ 13612248 (-)
XLOC_002646 BX293994.2 non-coding downstream 1263993 13607027 ~ 13607143 (-)
XLOC_002643 CR759894.1 non-coding downstream 1565953 13305065 ~ 13305183 (-)
XLOC_002666 NA non-coding upstream 773458 15716739 ~ 15724104 (-)
XLOC_002673 NA non-coding upstream 2062944 17006225 ~ 17010898 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_04161154_04166640 NA coding CI01000304 null 4160216 ~ 4166640 (-)