Gene
RNA
| Item | Value |
|---|---|
| gene id | G759982 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 88535640 ~ 88536047 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| leucine-rich repeat extensin-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU863742 | True | 348 | TUCP | 0.44 | 2 | 88535640 | 88536047 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509139 | rab12 | coding | downstream | 173334 | 88342455 ~ 88362306 (-) |
| LOC110518901 | LOC106596607 | coding | downstream | 204145 | 88077201 ~ 88331495 (-) |
| LOC110530857 | ndufv2 | coding | downstream | 518537 | 88002853 ~ 88017103 (-) |
| LOC110531046 | ankrd12 | coding | downstream | 534520 | 87944259 ~ 88001120 (-) |
| LOC110530858 | NA | coding | downstream | 592027 | 87940808 ~ 87943613 (-) |
| LOC110530889 | LOC103396682 | coding | upstream | 135418 | 88671465 ~ 88819127 (-) |
| LOC110530888 | LOC106569654 | coding | upstream | 292024 | 88827984 ~ 88833229 (-) |
| pak1ip1 | pak1ip1 | coding | upstream | 298510 | 88834557 ~ 88846601 (-) |
| LOC110530885 | LOC106569697 | coding | upstream | 328514 | 88864561 ~ 88883016 (-) |
| LOC110530884 | LOC106569698 | coding | upstream | 369265 | 88905312 ~ 88919239 (-) |
| G759479 | NA | non-coding | downstream | 13994 | 88521254 ~ 88521646 (-) |
| G759478 | NA | non-coding | downstream | 14981 | 88520052 ~ 88520659 (-) |
| G759446 | NA | non-coding | downstream | 44489 | 88488311 ~ 88491151 (-) |
| G759442 | NA | non-coding | downstream | 58487 | 88476591 ~ 88477153 (-) |
| G759421 | NA | non-coding | downstream | 95012 | 88430998 ~ 88443468 (-) |
| G759987 | NA | non-coding | upstream | 12469 | 88548516 ~ 88548864 (-) |
| G759989 | NA | non-coding | upstream | 13572 | 88549619 ~ 88550719 (-) |
| G760001 | NA | non-coding | upstream | 54894 | 88590941 ~ 88597105 (-) |
| G760003 | NA | non-coding | upstream | 64937 | 88600984 ~ 88603305 (-) |
| G760012 | NA | non-coding | upstream | 85335 | 88621382 ~ 88621655 (-) |
| G757788 | NA | other | downstream | 2303448 | 86230374 ~ 86308150 (-) |
| G757422 | NA | other | downstream | 2671753 | 85863011 ~ 85863887 (-) |
| G757292 | LOC106569817 | other | downstream | 2780402 | 85703130 ~ 85756434 (-) |
| G759998 | NA | other | upstream | 127557 | 88638913 ~ 88667229 (-) |
| G760051 | NA | other | upstream | 166944 | 88702991 ~ 88704054 (-) |
| G760165 | NA | other | upstream | 481002 | 89017049 ~ 89017979 (-) |
| G760182 | LOC106569755 | other | upstream | 543251 | 89079298 ~ 89081345 (-) |
