Gene
RNA
| Item | Value |
|---|---|
| gene id | G760030 |
| gene name | LOC106596630 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 88647271 ~ 88651284 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: metallophosphoesterase 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU863828 | True | 348 | lncRNA | 0.47 | 3 | 88647271 | 88651284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531049 | LOC106591876 | coding | downstream | 76279 | 88379937 ~ 88570992 (-) |
| LOC110509139 | rab12 | coding | downstream | 284965 | 88342455 ~ 88362306 (-) |
| LOC110518901 | LOC106596607 | coding | downstream | 315776 | 88077201 ~ 88331495 (-) |
| LOC110530857 | ndufv2 | coding | downstream | 630168 | 88002853 ~ 88017103 (-) |
| LOC110531046 | ankrd12 | coding | downstream | 646151 | 87944259 ~ 88001120 (-) |
| LOC110530889 | LOC103396682 | coding | upstream | 20181 | 88671465 ~ 88819127 (-) |
| LOC110530888 | LOC106569654 | coding | upstream | 176787 | 88827984 ~ 88833229 (-) |
| pak1ip1 | pak1ip1 | coding | upstream | 183273 | 88834557 ~ 88846601 (-) |
| LOC110530885 | LOC106569697 | coding | upstream | 213277 | 88864561 ~ 88883016 (-) |
| LOC110530884 | LOC106569698 | coding | upstream | 254028 | 88905312 ~ 88919239 (-) |
| G759999 | NA | non-coding | downstream | 3010 | 88642204 ~ 88644261 (-) |
| G760019 | NA | non-coding | downstream | 10887 | 88634846 ~ 88636384 (-) |
| G760017 | NA | non-coding | downstream | 13688 | 88631749 ~ 88633583 (-) |
| G760012 | NA | non-coding | downstream | 25616 | 88621382 ~ 88621655 (-) |
| G760003 | NA | non-coding | downstream | 43966 | 88600984 ~ 88603305 (-) |
| G760037 | NA | non-coding | upstream | 18103 | 88669387 ~ 88670094 (-) |
| G760043 | NA | non-coding | upstream | 55083 | 88706367 ~ 88804080 (-) |
| G760070 | NA | non-coding | upstream | 157697 | 88808981 ~ 88809432 (-) |
| G760074 | NA | non-coding | upstream | 169656 | 88820940 ~ 88821168 (-) |
| G759982 | NA | other | downstream | 111224 | 88535640 ~ 88536047 (-) |
| G759421 | NA | other | downstream | 203803 | 88430998 ~ 88443468 (-) |
| LOC110530858 | NA | other | downstream | 704449 | 87940808 ~ 87943613 (-) |
| G757788 | NA | other | downstream | 2415079 | 86230374 ~ 86308150 (-) |
| G757422 | NA | other | downstream | 2783384 | 85863011 ~ 85863887 (-) |
| G759998 | NA | other | upstream | 12320 | 88638913 ~ 88667229 (-) |
| G760051 | NA | other | upstream | 51707 | 88702991 ~ 88704054 (-) |
| G760165 | NA | other | upstream | 365765 | 89017049 ~ 89017979 (-) |
| G760182 | LOC106569755 | other | upstream | 428014 | 89079298 ~ 89081345 (-) |
