G759538


Basic Information

Item Value
gene id G759538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88653290 ~ 88653703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863148
ggtgaggtctctccaacgcatcaccggggacaaactacctgccctccaggatacctacaccacccgatgtcacaggaaggctgaaaagataatcaaggacatcaaccacccgagccacgtcCTGTTCACCccgagctgggacagagagactgaaaacagcttctatctcaaggccatcagactgttaaatggccatcactagccggctacaacccggttactcaaccctgcaccttagaggatGCTGCCCAATACACATAGAcctggaatcactggccactttaatgtttacatactgtttaactcataattacattacagccttattctaaaatggattttaaaaatgtttttcttaaatctacacacaatacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU863148 True 377 lncRNA 0.46 2 88653290 88653703

Neighbor

gene id symbol gene type direction distance location
LOC110510807 LOC106569716 coding upstream 10528 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 593587 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 877843 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 961547 87687931 ~ 87691743 (+)
LOC110512128 LOC106596732 coding upstream 982186 87569072 ~ 87671104 (+)
LOC118965580 NA coding downstream 233131 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 420921 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 441133 89094836 ~ 89113049 (+)
usp33 LOC106569751 coding downstream 495287 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 571386 89225089 ~ 89291341 (+)
G759536 NA non-coding upstream 2298 88650385 ~ 88650992 (+)
G759533 NA non-coding upstream 17566 88634873 ~ 88635724 (+)
G759516 NA non-coding upstream 48669 88603996 ~ 88604621 (+)
G759509 NA non-coding upstream 55560 88591342 ~ 88597730 (+)
G759496 NA non-coding upstream 96429 88556144 ~ 88556861 (+)
G759555 NA non-coding downstream 40775 88694478 ~ 88696111 (+)
G759556 NA non-coding downstream 45971 88697974 ~ 88701419 (+)
G759560 NA non-coding downstream 51695 88705398 ~ 88706202 (+)
G759489 NA non-coding downstream 52631 88706334 ~ 88707776 (+)
G759567 NA non-coding downstream 147788 88801491 ~ 88802329 (+)
G759031 LOC106569827 other upstream 542990 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 546343 88082021 ~ 88106947 (+)
G758988 NA other upstream 658145 87991970 ~ 87995145 (+)
G758976 ankrd12 other upstream 681361 87959523 ~ 87971929 (+)
G758892 NA other upstream 776606 87875120 ~ 87876684 (+)
G759598 NA other downstream 207376 88861079 ~ 88861828 (+)
LOC118965583 LOC106569839 other downstream 914300 89560138 ~ 89659347 (+)
G759892 NA other downstream 1042717 89696420 ~ 89696907 (+)

Expression


Co-expression Network