G759556


Basic Information

Item Value
gene id G759556
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88697974 ~ 88701419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863171
TGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccagtggtacagtagatggacccgtatggagtgaggaaggccagtggtacagtagatggacccgtatggtggatggagtgaggaaggccagtggtacagtagatggacccgtatggtggatggagtgaggaaggccagtggtacagtagatggatccgtatggtggatggagtgaggaaggccagtggtacagtagatggacccgtatggtggatggagtgaggaaggccAGTGGTACAGTAGATGGACCCGAATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGGACCCGAATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccAGTAGTACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccAGTGGTACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTAGTACAGTAGAGGgacccgtatggtggatggagtgaggaaggccagtagtacagtagatggacccgtatggtggatggagtgaggaaggtcagtagtacagtagatggacccgtatggtggatggagtgaggaagGCCAGTAGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccAGTAGTACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccAGTAGTACAGTAGATGGGCCCGTATGGAGTGAGGAAGGCCAGTAGTACAGTAGATGGACCCGTATGGTGGATGG
>TU863172
TGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccagtggtacagtagatggacccgtatggagtgaggaaggccagtggtacagtagatggacccgtatggtggatggagtgaggaaggccagtggtacagtagatggacccgtatggtggatggagtgaggaaggccagtggtacagtagatggatccgtatggtggatggagtgaggaaggccagtggtacagtagatggacccgtatggtggatggagtgaggaaggccAGTGGTACAGTAGATGGACCCGAATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGGACCCGAATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccAGTAGTACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTGGTACAGTAGATGgacccgtatggtggatggagtgaggaaggccAGTGGTACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTAGTACAGTAGAGGgacccgtatggtggatggagtgaggaaggccagtagtacagtagatggacccgtatggtggatggagtgaggaaggtcagtagtacagtagatggacccgtatggtggatggagtgaggaaggtCAGTAGTACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTGATACAGTAGATGGACCCGTATGGAGTGAGGAAGGCCAGTAGTACAGTAGATAgacccgtatggtggatggagtgaggaaggccAGTGGTACAGTAGATGGACCCGTATGGAGTG
>TU863174
gacccgtatggtggatggagtgaggaaggccagtagtacagtagatggacccgtatggtggatggagtgaggaaggccagtagtacagtagatggacccgtatggtggatggagtgaggaaggtcagtagtacagtagatggacccgtatggtggatggagtgaggaaggtcagtggtacagtagatggacccgtatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU863171 False 894 TUCP 0.54 4 88697974 88701419
TU863172 False 844 TUCP 0.54 3 88697974 88701075
TU863174 True 199 lncRNA 0.53 2 88699674 88700171

Neighbor

gene id symbol gene type direction distance location
LOC110510805 LOC105030507 coding upstream 32354 88646400 ~ 88667320 (+)
LOC110510807 LOC106569716 coding upstream 56912 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 639971 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 924227 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 1007931 87687931 ~ 87691743 (+)
LOC118965580 NA coding downstream 186663 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 374453 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 394665 89094836 ~ 89113049 (+)
usp33 LOC106569751 coding downstream 448819 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 524918 89225089 ~ 89291341 (+)
G759555 NA non-coding upstream 3563 88694478 ~ 88696111 (+)
G759513 NA non-coding upstream 9521 88598422 ~ 88690153 (+)
G759538 NA non-coding upstream 45971 88653290 ~ 88653703 (+)
G759536 NA non-coding upstream 48682 88650385 ~ 88650992 (+)
G759533 NA non-coding upstream 63950 88634873 ~ 88635724 (+)
G759560 NA non-coding downstream 5227 88705398 ~ 88706202 (+)
G759489 NA non-coding downstream 6163 88706334 ~ 88707776 (+)
G759567 NA non-coding downstream 101320 88801491 ~ 88802329 (+)
G759571 NA non-coding downstream 109875 88810046 ~ 88811160 (+)
G759582 NA non-coding downstream 125882 88826053 ~ 88826279 (+)
G759031 LOC106569827 other upstream 589374 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 592727 88082021 ~ 88106947 (+)
G758988 NA other upstream 704529 87991970 ~ 87995145 (+)
G758976 ankrd12 other upstream 727745 87959523 ~ 87971929 (+)
G758892 NA other upstream 822990 87875120 ~ 87876684 (+)
G759598 NA other downstream 160908 88861079 ~ 88861828 (+)
LOC118965583 LOC106569839 other downstream 867832 89560138 ~ 89659347 (+)
G759892 NA other downstream 996249 89696420 ~ 89696907 (+)
G760623 NA other downstream 1460099 90160270 ~ 90208959 (+)

Expression


Co-expression Network