G759560


Basic Information

Item Value
gene id G759560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88705398 ~ 88706202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863179
taagacatgtataaaagcaacagaatCCATTAATAAGAAGTGGCTAGAAACGTCTtatatatggtgagctaccgagtagctaggacaggcaagccccatactattgtggaggagtgggtaggacaggcaagccccatactattgtggaggagtgggtaGGACAGggaagccccatactattgtggaggagtgggtaggacagacaagccccatactattgtggaggagtgggtaGGACAGggaagccccatactattgtggaggagtgggtaGGACAGggaagccccatactattgtggaggagtgggtaggacaggcaagccccatactattgtggggCTTGCAAAACCGTacctcaaggcttaaaaaccgTACCTCTTTCAGGCCCTTGAGCCCTGCGGGGGTTCTCGGCAGCCCTGCGGGGGTTCTCGGCAGTGGAGGCCCACAGTTAAACGTCATGATCCAGACCTGGGAGGTGAGGGTGGGGCTCCAGGCAGTTGCCCTGGCAACAGAGGATGAGATAAAGACTGAAGTCACAGATCAGATTAGTGAGAGAATAAAACTGGGAAACTGATATTATACAGCTTTGTTTACTTGTATCTGTCCAGTTCCTCAAGCAGCGAAGCTCTTTTATCATCATACACAttaccccactcctcctcctccgtctccctcctcagtctccctccccactcctcagtctccctccccactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU863179 True 715 lncRNA 0.52 3 88705398 88706202

Neighbor

gene id symbol gene type direction distance location
LOC110510805 LOC105030507 coding upstream 38078 88646400 ~ 88667320 (+)
LOC110510807 LOC106569716 coding upstream 62636 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 645695 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 929951 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 1013655 87687931 ~ 87691743 (+)
LOC118965580 NA coding downstream 180632 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 368422 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 388634 89094836 ~ 89113049 (+)
usp33 LOC106569751 coding downstream 442788 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 518887 89225089 ~ 89291341 (+)
G759556 NA non-coding upstream 5227 88697974 ~ 88701419 (+)
G759555 NA non-coding upstream 9287 88694478 ~ 88696111 (+)
G759538 NA non-coding upstream 51695 88653290 ~ 88653703 (+)
G759536 NA non-coding upstream 54406 88650385 ~ 88650992 (+)
G759533 NA non-coding upstream 69674 88634873 ~ 88635724 (+)
G759489 NA non-coding downstream 132 88706334 ~ 88707776 (+)
G759567 NA non-coding downstream 95289 88801491 ~ 88802329 (+)
G759571 NA non-coding downstream 103844 88810046 ~ 88811160 (+)
G759582 NA non-coding downstream 119851 88826053 ~ 88826279 (+)
G759586 NA non-coding downstream 128441 88834643 ~ 88834933 (+)
G759031 LOC106569827 other upstream 595098 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 598451 88082021 ~ 88106947 (+)
G758988 NA other upstream 710253 87991970 ~ 87995145 (+)
G758976 ankrd12 other upstream 733469 87959523 ~ 87971929 (+)
G759598 NA other downstream 154877 88861079 ~ 88861828 (+)
LOC118965583 LOC106569839 other downstream 861801 89560138 ~ 89659347 (+)
G759892 NA other downstream 990218 89696420 ~ 89696907 (+)
G760623 NA other downstream 1454068 90160270 ~ 90208959 (+)

Expression


Co-expression Network