G759489


Basic Information

Item Value
gene id G759489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88706334 ~ 88707776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863085
accactcctcctccctctctgatgcagcactccatcactctccttggtcaaataaccactacacagcctggagatgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccactaagcccaaaccagatgggatggcataccgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaaacaAAAtctctgacagtgtcaccagcaaagcacccccacaccatcacacctcctcctccatgcttcacggtgggaagcacatatgcagagatcatccgttcacctactctgtctcacaaagacacagcggttggaaccaaaaatctctaatttggactcatcagaacaaaggacaaatttccaccggtctaatgtccattgcgcaggtttcttggcccaagcaagtctctttttctcacgtgagccagtttcatcatagcgcttgatggttttccagactgcacttgaagaagcgttcaaagttcttgaaatgttcctcagtgactgaccttcatgtctcaaagtaatgatggactgttgtttctctttgcttatttgagctgttcttgctgtaatatggacttggtcttttaccaaattgggcGATCTTCTGTTTaaccattttttggttactacatgattataaAAAACACGGATCGTTATatgattaaaacacctggtttctCTGAGTAATATTTCAAAttgattaggacatgtaaacaccttaaaATGGGAGATCCAGAAGTGTGCTTGATCATAGCATGTGTCAGCACCAGCGGAGagagaccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcggaaAACAACTGAACGTAGTAGGCTTTTTTACAAGTCATTTTCAGGAttaaaatatgcttctcaacagTAACCCGTTGGCTGCATTTCATCAGGTAGCCAGATTACAGCCATCAGGTAGCCGGATTACAGCCATCAGGTAGCCGGATTACAGCCATCAGGTAGCCGGATTACAGCCATCAGGTAGCCGGATTACAGCCATCAGGTAGCCGGATTACAGCCATCAGGTAGCCGGATTACagtgtccatgtaaaaaaaaaaaaaaagattattaACGAAATGATTCTTCTTCTAGCCGAGCATGTTTTAATTGAACTATTATATCGATCTGATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU863085 True 1237 lncRNA 0.44 2 88706334 88707776

Neighbor

gene id symbol gene type direction distance location
LOC110510805 LOC105030507 coding upstream 39014 88646400 ~ 88667320 (+)
LOC110510807 LOC106569716 coding upstream 63572 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 646631 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 930887 87745792 ~ 87775447 (+)
LOC110512127 LOC106591122 coding upstream 1014591 87687931 ~ 87691743 (+)
LOC118965580 NA coding downstream 179058 88886834 ~ 88903834 (+)
slc25a24l LOC106569755 coding downstream 366848 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 387060 89094836 ~ 89113049 (+)
usp33 LOC106569751 coding downstream 441214 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 517313 89225089 ~ 89291341 (+)
G759560 NA non-coding upstream 132 88705398 ~ 88706202 (+)
G759556 NA non-coding upstream 6163 88697974 ~ 88701419 (+)
G759555 NA non-coding upstream 10223 88694478 ~ 88696111 (+)
G759538 NA non-coding upstream 52631 88653290 ~ 88653703 (+)
G759536 NA non-coding upstream 55342 88650385 ~ 88650992 (+)
G759567 NA non-coding downstream 93715 88801491 ~ 88802329 (+)
G759571 NA non-coding downstream 102270 88810046 ~ 88811160 (+)
G759582 NA non-coding downstream 118277 88826053 ~ 88826279 (+)
G759586 NA non-coding downstream 126867 88834643 ~ 88834933 (+)
G759592 NA non-coding downstream 140662 88848438 ~ 88848652 (+)
G759031 LOC106569827 other upstream 596034 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 599387 88082021 ~ 88106947 (+)
G758988 NA other upstream 711189 87991970 ~ 87995145 (+)
G758976 ankrd12 other upstream 734405 87959523 ~ 87971929 (+)
G759598 NA other downstream 153303 88861079 ~ 88861828 (+)
LOC118965583 LOC106569839 other downstream 860227 89560138 ~ 89659347 (+)
G759892 NA other downstream 988644 89696420 ~ 89696907 (+)
G760623 NA other downstream 1452494 90160270 ~ 90208959 (+)

Expression


Co-expression Network