G760097 (LOC106569698)



Basic Information


Item Value
gene id G760097
gene name LOC106569698
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88861111 ~ 88861543 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU863927
CCTCACTTTGCACTGGTATCTGCTGCGTTCTCTCACCCAGGTCTTCAAAGTCAAACGTGACTGTTACCGATTGTTGTAGCTTGTTAGTTATCGGCTCATAGATTTGATGGACAACATGGGCGTTTGTAAGGATGAACTTTTTAAACAGAAGGAAGCCAGTTCCTTTTGGTGTCCCTTCAATTCTCACCTGACAAACAGAAGCACTCAGCTCCATTAGTCTCTTCACTTTCTTCACCTCTTGGAATCtctgtgttttctttccaaactcTACTCTTAAGAATTGTTGCACGTCTGAAGGCTTtttcaaattctctctctctttcaagtgATCTACCAAACCTGCATATTGGGAACGCAGGATGCTTAGGATCTCTTTAGAGTTTGGAATCTCTTGCCTTTTTTGCTTCACTACCAGAGAACTACCATCTTTTCC

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU863927 True 433 lncRNA 0.42 1 88861111 88861543

Neighbor


gene id symbol gene type direction distance location
pak1ip1 pak1ip1 coding downstream 14510 88834557 ~ 88846601 (-)
LOC110530888 LOC106569654 coding downstream 27882 88827984 ~ 88833229 (-)
LOC110530889 LOC103396682 coding downstream 41984 88671465 ~ 88819127 (-)
LOC110531049 LOC106591876 coding downstream 290119 88379937 ~ 88570992 (-)
LOC110509139 rab12 coding downstream 498805 88342455 ~ 88362306 (-)
LOC110530885 LOC106569697 coding upstream 3018 88864561 ~ 88883016 (-)
LOC110530884 LOC106569698 coding upstream 43769 88905312 ~ 88919239 (-)
LOC110530883 LOC106569748 coding upstream 62180 88923723 ~ 88971809 (-)
LOC110530871 dnajb4 coding upstream 129690 88991233 ~ 89060503 (-)
LOC110530869 LOC106569754 coding upstream 203715 89065258 ~ 89073172 (-)
G760096 NA non-coding downstream 1113 88859795 ~ 88859998 (-)
G760095 NA non-coding downstream 1709 88858957 ~ 88859402 (-)
G760094 NA non-coding downstream 3297 88857580 ~ 88857814 (-)
G760092 NA non-coding downstream 4956 88855309 ~ 88856155 (-)
G760090 NA non-coding downstream 11192 88849697 ~ 88849919 (-)
G760115 NA non-coding upstream 22572 88884115 ~ 88884361 (-)
G760121 NA non-coding upstream 34994 88896537 ~ 88896743 (-)
G760124 NA non-coding upstream 40239 88901782 ~ 88902789 (-)
G760103 NA non-coding upstream 41885 88903428 ~ 88903754 (-)
G760125 NA non-coding upstream 46462 88908005 ~ 88908252 (-)
G760051 NA other downstream 157057 88702991 ~ 88704054 (-)
G759998 NA other downstream 195971 88638913 ~ 88667229 (-)
G759982 NA other downstream 325064 88535640 ~ 88536047 (-)
G759421 NA other downstream 417643 88430998 ~ 88443468 (-)
G760165 NA other upstream 155506 89017049 ~ 89017979 (-)
G760182 LOC106569755 other upstream 217755 89079298 ~ 89081345 (-)
G760192 LOC106569753 other upstream 238301 89099844 ~ 89102382 (-)
G760306 NA other upstream 469738 89331281 ~ 89332776 (-)
LOC118965582 st6galnac5 other upstream 512342 89352710 ~ 89408042 (-)

Expression



Co-expression Network