G759668


Basic Information

Item Value
gene id G759668
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89008013 ~ 89008991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863332
tgttattggcagagagggttTGAGTGGGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGAAGGGAACCTAGTTGTTATTGGTAGAGAGGGTCTGAGTGggggagggaacctagctgttattggcagagagggtcTGAGTGGGAAGGGAACCtagttgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagggtctgagtggggagggaacctagttgttattggcagagagggtcTGAGTGGGGCGGGaacctagctgttattggcagagagggtctgagtggggagggaacctagttgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagGTTCTGAGTGGAGGAGGGaacctagctgttattggcagagagGGTCTGAGTGGAGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGACAATTtcccagtattattccaacctcatagtgtggaaatat
>TU863333
tgttattggcagagagggttTGAGTGGGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGAAGGGAACCTAGTTGTTATTGGTAGAGAGGGTCTGAGTGggggagggaacctagctgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagggtctgagtggggagggaacctagttgttattggcagagagggtcTGAGTGGGGCGGGaacctagctgttattggcagagagggtctgagtggggagggaacctagttgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagGGTCTGAGTGGAGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGACAATTtcccagtattattccaacctcatagtgtggaaatat
>TU863334
tgttattggcagagagggttTGAGTGGGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGAAGGGAACCTAGTTGTTATTGGTAGAGAGGGTCTGAGTGggggagggaacctagctgttattggcagagagggtcTGAGTGGGAAGGGAACCtagttgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagggtctgagtggggagggaacctagttgttattggcagagagggtcTGAGTGGGGCGGGaacctagctgttattggcagagagggtctgagtggggagggaacctagttgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagGTTCTGAGTGGAGGAGGGaacctagctgttattggcagagagGTTCTGAGTGGAGGAGGGAACCTAGCTGTTATTGGTAGAgagggtctgagtggggagggaacCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGAGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGACAATTtcccagtattattccaacctcatagtgtggaaatat
>TU863335
tgttattggcagagagggttTGAGTGGGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGggggagggaacctagttgttattggcagagagggtctgagtggggagggaacctagctgttattggcagagagggtcTGAGTGGGGCGGGGAACCTAGCTGTTATTGGTAGAGAGGTTCTGAGTGGAGGAGGGAACCTAGCTGTTATTGGTAGAGAGGTTCTGAGTGGAGGAGGGaacctagctgttattggcagagagGGTCTGAGTGGAGGAGGGAACCTAGCTGTTATTGGTAGAGAGGGTCTGAGTGGGACAATTtcccagtattattccaacctcatagtgtggaaatat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584621 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU863332 False 565 lncRNA 0.52 4 89008013 89008991
TU863333 False 441 lncRNA 0.52 3 89008013 89008991
TU863334 False 648 lncRNA 0.52 4 89008013 89008991
TU863335 True 362 lncRNA 0.51 3 89008013 89008991

Neighbor

gene id symbol gene type direction distance location
LOC118965580 NA coding upstream 104179 88886834 ~ 88903834 (+)
LOC110510805 LOC105030507 coding upstream 340693 88646400 ~ 88667320 (+)
LOC110510807 LOC106569716 coding upstream 365251 88625441 ~ 88642762 (+)
acss2l LOC106596660 coding upstream 948310 88017220 ~ 88059703 (+)
LOC110513441 apcdd1 coding upstream 1232566 87745792 ~ 87775447 (+)
slc25a24l LOC106569755 coding downstream 65633 89074624 ~ 89139486 (+)
fubp1 LOC106569753 coding downstream 85845 89094836 ~ 89113049 (+)
usp33 LOC106569751 coding downstream 139999 89148990 ~ 89223706 (+)
LOC110530860 LOC106569749 coding downstream 216098 89225089 ~ 89291341 (+)
LOC118965581 NA coding downstream 252623 89261614 ~ 89263950 (+)
G759642 NA non-coding upstream 31035 88975618 ~ 88976978 (+)
G759636 NA non-coding upstream 52250 88955457 ~ 88955763 (+)
G759630 LOC106569748 non-coding upstream 63571 88940107 ~ 88944442 (+)
G759618 NA non-coding upstream 78967 88928076 ~ 88929046 (+)
G759678 NA non-coding downstream 9180 89018171 ~ 89018766 (+)
G759680 NA non-coding downstream 33696 89042687 ~ 89137931 (+)
G759682 NA non-coding downstream 39222 89048213 ~ 89048777 (+)
G759716 NA non-coding downstream 146025 89155016 ~ 89155613 (+)
G759598 NA other upstream 146185 88861079 ~ 88861828 (+)
G759556 NA other upstream 306594 88697974 ~ 88701419 (+)
G759031 LOC106569827 other upstream 897713 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 901066 88082021 ~ 88106947 (+)
G758988 NA other upstream 1012868 87991970 ~ 87995145 (+)
LOC118965583 LOC106569839 other downstream 559012 89560138 ~ 89659347 (+)
G759892 NA other downstream 687429 89696420 ~ 89696907 (+)
G760623 NA other downstream 1151279 90160270 ~ 90208959 (+)
G760718 NA other downstream 1365096 90362653 ~ 90400472 (+)

Expression


Co-expression Network