G760158


Basic Information

Item Value
gene id G760158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89008016 ~ 89009423 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU864008
TAACGATACAGGGCCCAGATGCAGACACTGGAGGCAGATGTTTAGAGTCTCTgattataaaacaaggggcaggaAAGAGACGGGCCGTGGACAGGCAAAATATCAGAACCAGGTCGGAGTCCAGgaagtacagagtggcaggcaggctgaatggtcaggcaggcgggctcagtgtcaggacaggcaaaggtcagaaccgggaggactagaacaACAGAGACttggaaaaagcaggagcacggaaaaacacgctggttgacttggcatgacaagacaaactggcaacaaacaaacagagaacacaggactAAATACCCAGGGGATGATGGGGAAaacgggtgacacctggaggtgagtggagacaatcacaaagacaggtgaaacagatcagggcgtgacaaaaacatgattttcctgcattttatatactgtatatttccacactatgaggttggaataatactgggaAATTGTCCCACTCAGACCCTCTCTACCAATAACAGCTAGGTTCCCTCCTCCACTCAGACCCTCTCTACCAATAACAGCTAGgttccctccccactcagaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacaactaggttccctccccactcagaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacaactaGGTTCCCTTCCCACTCAgaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacaactaGGTTCCCTTCCCACTCAGACCCTCTCTACCAATAACAACTAGGTTCCCTTCCCACTCAGACCCTCTCTACCAATAACAGCTAGGTTCCCTCCCCACTCAaaccctctctgccaata
>TU864011
TAACGATACAGGGCCCAGATGCAGACACTGGAGGCAGATGTTTAGAGTCTCTgattataaaacaaggggcaggaAAGAGACGGGCCGTGGACAGGCAAAATATCAGAACCAGGTCGGAGTCCAGgaagtacagagtggcaggcaggctgaatggtcaggcaggcgggctcagtgtcaggacaggcaaaggtcagaaccgggaggactagaacaACAGAGACttggaaaaagcaggagcacggaaaaacacgctggttgacttggcatgacaagacaaactggcaacaaacaaacagagaacacaggactAAATACCCAGGGGATGATGGGGAAaacgggtgacacctggaggtgagtggagacaatcacaaagacaggtgaaacagatcagggcgtgacaaaaacatgattttcctgcattttatatactgtatatttccacactatgaggttggaataatactgggaAATTGTCCCACTCAGACCCTCTCTACCAATAACAGCTAGgttccctccccactcagaccctcTCTACCAATAACAGCTAGGTTCCCTCCTCCACTCAGAccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacaactaGGTTCCCTTCCCACTCAgaccctctctgccaataacagctaggttccctccccactcagaccctctctgccaataacaactaGGTTCCCTTCCCACTCAGACCCTCTCTACCAATAACAACTAGGTTCCCTTCCCACTCAGACCCTCTCTACCAATAACAGCTAGGTTCCCTCCCCACTCAaaccctctctgccaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU864008 False 992 lncRNA 0.51 3 89008016 89009423
TU864011 True 910 lncRNA 0.51 4 89008016 89009423

Neighbor

gene id symbol gene type direction distance location
LOC110530883 LOC106569748 coding downstream 36207 88923723 ~ 88971809 (-)
LOC110530884 LOC106569698 coding downstream 88777 88905312 ~ 88919239 (-)
LOC110530885 LOC106569697 coding downstream 125000 88864561 ~ 88883016 (-)
pak1ip1 pak1ip1 coding downstream 161415 88834557 ~ 88846601 (-)
LOC110530888 LOC106569654 coding downstream 174787 88827984 ~ 88833229 (-)
LOC110530869 LOC106569754 coding upstream 55835 89065258 ~ 89073172 (-)
miga1 miga1 coding upstream 117045 89126468 ~ 89148695 (-)
LOC118965582 st6galnac5 coding upstream 343287 89352710 ~ 89408042 (-)
LOC110530890 LOC106569838 coding upstream 579914 89589337 ~ 89634342 (-)
LOC118965584 LOC106592566 coding upstream 579916 89589339 ~ 89598617 (-)
G760157 NA non-coding downstream 117 89007248 ~ 89007899 (-)
G760147 NA non-coding downstream 30980 88975087 ~ 88977036 (-)
G760141 NA non-coding downstream 52995 88954674 ~ 88955021 (-)
G760125 NA non-coding downstream 99764 88908005 ~ 88908252 (-)
G760191 NA non-coding upstream 81037 89090460 ~ 89094398 (-)
G760181 NA non-coding upstream 103223 89112646 ~ 89118302 (-)
G760244 NA non-coding upstream 187109 89196532 ~ 89197593 (-)
G760247 NA non-coding upstream 194388 89203811 ~ 89204225 (-)
G760257 NA non-coding upstream 210708 89220131 ~ 89223712 (-)
G760051 NA other downstream 303962 88702991 ~ 88704054 (-)
G759998 NA other downstream 342876 88638913 ~ 88667229 (-)
G759982 NA other downstream 471969 88535640 ~ 88536047 (-)
G759421 NA other downstream 564548 88430998 ~ 88443468 (-)
G760165 NA other upstream 7626 89017049 ~ 89017979 (-)
G760182 LOC106569755 other upstream 69875 89079298 ~ 89081345 (-)
G760192 LOC106569753 other upstream 90421 89099844 ~ 89102382 (-)
G760306 NA other upstream 321858 89331281 ~ 89332776 (-)

Expression


Co-expression Network