XLOC_002655 (si:dkey-88l16.2)


Basic Information

Item Value
gene id XLOC_002655
gene name si:dkey-88l16.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 14936045 ~ 14940346 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004936
AATGCAGAAGAGACATGGCAGCCAAAAGTGAAAAAATGGAACTAACATTTTCCCTTAGAAGAAAAGAAATGGTCCAAGAGCAGCCAATGATTGTAGAGGTTCAGGAGAGGTGGCCTGCACTCTTTTTTCAAGAACAGATCTGTGAGGAATTTTTCCGCATCACCAACAAAGACCTTCTAGGAGTCTTCATGGCAGCCACTGACAAGTACACACCAAAGCTTCTGAAATTATACAGAGCCAGAAAAGGAGCGTTTGGACATGAAATGGAAGAGCTCCTGGAAAGACTTGATGAAAGGACAACAGAAATTGTTAATCACAGAAGGACTGCTGCTTTGGAGGGCCTGCCTTTGTTTCTTCGAGAGAAACAAACTAACCTTTTCAAGAAATGTAAAGAAACTAAAGATGCAACAAAGGGCGTATCAGTTGGCATTCTCTATGTTACGGAAGATGACTCCCGGGCAGCATCACCAGTGATCCAGAACATTGCTGTTGTACTGGAAGAGGTAGTTGTTTTGGAAGACATTCCAGATACCTCAAGTGCTGTAGCATACCTCTTTGGCCTTCTTTATGCACTCAACTTTTCCTATCCCAAAGAACTCCGGTACACTTTTGACACAATTCAGAATGTTTTCATGGAGCTTGGGACTGAATGTACGCAACGTGTGCTTTCTCTTAAAAACAAGATGTTAAactaatactgtaaacagtgttgtgtCAATGGTCTGATGTTACAAAGACCTAATTTACAATTTGAGTACTAAATCTGATTCATGAGAGCCACTGTTTAGGCACTGTGTTCAGTTAAATGggtaacacttcataataactacacactatgaatcatttgttaagcattagtaAATAGTtagttcattatttgttaagtatt
>TCONS_00004937
TCGGACTTCACAGATATTTTCGACTCTTCGAAgaactaaacattaacttgttCCTGTAGATGATCTCCTCAAGACTTCATGCAGTGTAAAACTGCAAATTCAGCATTTCAAGTGAAGATGTCCTTCTAAAGCACTATCAGCTACATCATCATTGAATTTCCAACTGGCCCTGTCTTTACACGCAGtgtgtttgtgcttttaaaaCTGCAGAAGTTAATGCAGAAGAGACATGGCAGCCAAAAGAGAGGTGGCCTGCACTCTTTTTTCAAGAACAGATCTGTGAGGAATTTTTCCGCATCACCAACAAAGACCTTCTAGGAGTCTTCATGGCAGCCACTGACAAGTACACACCAAAGCTTCTGAAATTATACAGAGCCAGAAAAGGAGCGTTTGGACATGAAATGGAAGAGCTCCTGGAAAGACTTGATGAAAGGGCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095137

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004936 False 889 mRNA 0.40 4 14936045 14938235
TCONS_00004937 True 438 processed_transcript 0.42 5 14937827 14940346

Neighbor

gene id symbol gene type direction distance location
XLOC_002653 CT027820.1 coding downstream 203646 14732283 ~ 14732399 (-)
XLOC_002652 skor2 coding downstream 379067 14547941 ~ 14556978 (-)
XLOC_002651 ier3ip1 coding downstream 390387 14542726 ~ 14545658 (-)
XLOC_002650 hdhd2 coding downstream 395602 14525184 ~ 14540443 (-)
XLOC_002649 galt coding downstream 447527 14263684 ~ 14488518 (-)
XLOC_002656 NA coding upstream 90660 15031006 ~ 15042748 (-)
XLOC_002657 NA coding upstream 92626 15032972 ~ 15034960 (-)
XLOC_002658 cldn23a coding upstream 106491 15046837 ~ 15048781 (-)
XLOC_002659 cldn23b coding upstream 110123 15050469 ~ 15053614 (-)
XLOC_002660 CT027832.1 coding upstream 142064 15082410 ~ 15086297 (-)
XLOC_002648 BX000705.1 non-coding downstream 1004349 13931569 ~ 13931696 (-)
XLOC_002647 BX293994.1 non-coding downstream 1323797 13612133 ~ 13612248 (-)
XLOC_002646 BX293994.2 non-coding downstream 1328902 13607027 ~ 13607143 (-)
XLOC_002643 CR759894.1 non-coding downstream 1630862 13305065 ~ 13305183 (-)
XLOC_002666 NA non-coding upstream 776393 15716739 ~ 15724104 (-)
XLOC_002673 NA non-coding upstream 2065879 17006225 ~ 17010898 (-)

Expression


Co-expression Network