G760308


Basic Information

Item Value
gene id G760308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89432846 ~ 89433996 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU864241
AATTATCTATGTAGCTGCAGTAGTTGTATACTGTATCTAGTTTTTAAGTGTATATTACATCCAATATGTATAGAATCtatctgtcatttttatcatagttaCTATTCCAGTGTAGATTATGGTCACATTTCTATCATAGTTACTATTCCAGTGTAGATTATGGTCTTGTTTTTATCATAGTTACTATTCCAGTGTAGATTATAGTCTTGTTTTTATCATAGTTACTATTCCAGTGTAGATTATAGTCTTGTTTTTATCATAGTTACTATTCCAGTGTAGATTATGGTCTTGTTTTCATCATAGTTACTATTCCAGTGTAGATTATGGTCATGTTTTCATCATAGTTACTATTCCAGTGTAGATTATGGTCATGTTTTCATCATAGTTACTATTCCAGTGTAGATTATGGTCTTGTTTTCATCATAGTTACTATTCCAGTGTAGATGATAGTCTTGTTTTCATCATATTAGGAATCGTTGTAATTCTTTGACTGAATTCATAACTTGGATTCTGTTTTTACTGTTCCTTTTGGTGTCTTTGGTTTATAAACGGTAAATGCTGTATTGTAATGAAAcgctagcctgggtaccagtctgtttgtgcaaTCATTCCACTCCATGCCAACAACAGTTGGCATATGACATGGACTGGCATGTAGAATGAAatcacaaacagactggtacccaggctactgAAACTCCACAGTCACAGCAAATGTACCACCTTTTTTTCGATACAAGGAACAAAATTTGGTAAATACTTTggaacattttctctctctcgtcttgTCTCGTTAACATCTCGGCTGTGATGCGTGCAGCATATTGCATAAATTAAACCTCTCCACGCTTTTTAAATTAGTGTTTTATAAAAGGTGGTGAATTTTCTTTTGACAGTAATTTTAATAAAAATGTCTTacttctg
>TU864242
CAGTGTAGATTATGGTCTTGTTTTCATCATAGTTACTATTCCAGTGTAGATTATAGTCTTGTTTTTATCATAGTTACTATTCCAGTGTAGATTATAGTCTTGTTTTTATCATAGTTACTATTCCAGTGTAGATTATGGTCTTGTTTTCATCATAGTTACTATTCCAGTGTAGATTATGGTCTTGTTTTCATCATATTAGGAATCGTTGTAATTCTTTGACTGAATTCATAACTTGGATTCTGTTTTTACTGTTCCTTTTGGTGTCTTTGGTTTATAAACGGTAAATGCTGTATTGTAATGAAAcgctagcctgggtaccagtctgtttgtgcaaTCATTCCACTCCATGCCAACAACAGTTGGCATATGACATGGACTGGCATGTAGAATGAAatcacaaacagactggtacccaggctactgAAACTCCACAGTCACAGCAAATGTACCACCTTTTTTTCGATACAAGGAACAAAATTTGGTAAATACTTTggaacattttctctctctcgtcttgTCTCGTTAACATCTCGGCTGTGATGCGTGCAGCATATTGCATAAATTAAACCTCTCCACGCTTTTTAAATTAGTGTTTTATAAAAGGTGGTGAATTTTCTTTTGACAGTAATTTTAATAAAAATGTCTTacttctg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU864241 False 924 lncRNA 0.33 3 89432846 89433996
TU864242 True 653 lncRNA 0.35 3 89432846 89433684

Neighbor

gene id symbol gene type direction distance location
LOC118965582 st6galnac5 coding downstream 24804 89352710 ~ 89408042 (-)
miga1 miga1 coding downstream 284151 89126468 ~ 89148695 (-)
LOC110530869 LOC106569754 coding downstream 359674 89065258 ~ 89073172 (-)
LOC110530871 dnajb4 coding downstream 372343 88991233 ~ 89060503 (-)
LOC110530883 LOC106569748 coding downstream 461037 88923723 ~ 88971809 (-)
LOC110530890 LOC106569838 coding upstream 155341 89589337 ~ 89634342 (-)
LOC118965584 LOC106592566 coding upstream 155343 89589339 ~ 89598617 (-)
LOC118965585 NA coding upstream 171951 89605947 ~ 89607379 (-)
LOC110530891 LOC106925954 coding upstream 203647 89637643 ~ 89707054 (-)
LOC110530894 LOC106569835 coding upstream 289738 89723665 ~ 89770006 (-)
G760307 NA non-coding downstream 4458 89423125 ~ 89428388 (-)
G760338 NA non-coding downstream 21557 89410835 ~ 89411289 (-)
G760331 NA non-coding downstream 43502 89388859 ~ 89389344 (-)
G760329 NA non-coding downstream 52749 89379855 ~ 89380097 (-)
G760325 NA non-coding downstream 61131 89371398 ~ 89371715 (-)
G760312 NA non-coding upstream 1601 89435597 ~ 89438123 (-)
G760353 NA non-coding upstream 18753 89452749 ~ 89454455 (-)
G760354 NA non-coding upstream 24713 89458709 ~ 89496005 (-)
G760352 NA non-coding upstream 27571 89461567 ~ 89495173 (-)
G760358 NA non-coding upstream 103237 89537233 ~ 89537792 (-)
G760306 NA other downstream 100070 89331281 ~ 89332776 (-)
G760192 LOC106569753 other downstream 330464 89099844 ~ 89102382 (-)
G760182 LOC106569755 other downstream 351501 89079298 ~ 89081345 (-)
G760165 NA other downstream 414867 89017049 ~ 89017979 (-)
G760362 NA other upstream 100627 89534623 ~ 89535353 (-)
G760971 NA other upstream 906816 90340812 ~ 90341303 (-)
G761034 NA other upstream 1216400 90635679 ~ 90652740 (-)
G761176 NA other upstream 1362151 90796147 ~ 90797574 (-)
G761467 NA other upstream 1512483 90946479 ~ 90948106 (-)

Expression


Co-expression Network