G760312


Basic Information

Item Value
gene id G760312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89435597 ~ 89438123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU864249
ATGTTATGATAAAGTATACTGTTGTACATAGACTTCAGTGCTATGCACTCTTAACTATCACACATCGTCTCTAACTAACTATCACAACTGGTCTTTTCCCCCCTTAAATGAATCTGTTCCGTGTCTCTGTCCATGTAGCCAagacctacatttacctgacCCTGTAGTCTAGTCCATTTGTGAGTCCCAATTATATGTATTTTCTCCAGAAGTGTGAATCCAAgtgtaaaagcattggattggtggaggcatgggcAAGAGGGATTTTCCACCATGTTTCCGACACAGaaccagtcatttcctttcaaatcagtgaagCCAAGTGAACACGTGCACGCTGCGGAGACAGGAGAGGTAAATTGATTTTGTCCGCTGTGCACGTCTCTGTCTGTGTGATCCCTGTATATTGACGcctctacagtaatacagtagcaTGCTTTTTTTGTATCCGACTCAATGTACATATTTACTCTCACTGGCGTAGGTGTTTTATACTGTTCCAAACAGCCTGTGATTGTGATGTCATCCTCTGGCAGAGCCAGTCAGCGTTCTGGCCCCACTGCAGCAGACTGTTGACATGACGTTCCACACGtccgtcatttagcagacgctcttatccagagccacttactcTTTAAGTATCTCTTTACTCACTTTATCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACACGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACATAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAGGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAGGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACACGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAAGCGTCCATTTGCTTTCAGATTAAACTCAGAAACCAGACCATCCACAGTCCACTACTAGTCAGAAGTGTAGAGCTCTGTCAGTAACATAAGAGgcctgttgagagagagaggggctgtggaTTTTAACACCCCTGTCCCATTTTAGCACCCCGTCACCGTCCCTGTACCCCTTAGAGACTCTTTAGCTCCATTTGCCCTCTGTGTGATCTCGATCCATTTAGAGGCCCTCTGTGTGAACTCGACCCATTTAGAGGTCCTCTGTGTGACCTCGATCCATTTAGAGGTCCTGTGTGTGAGCTCAATCCATTTAGAGGTCCTTTGTGTGATCTCAATCCATTTAGAGGTCCTCTGTGTGAATCTCAATCCATTTAGAGGTCCTCTCTGTGATCTCGATCCATTTAGAGGTCTTCTGTGTGATCTCGATCCATTTAGAGGTCCTCTGTGTGATCTCGACCCATTTAGAGGTCCTCTGTGTGATCTCGATCCATTTAGAGGTCCTCTGTGATCTCGACCCATTTAGAGGTCCTCTGTGTGATCTCAATCCATATATCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCCCTTCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCCCTCCAATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTC
>TU864250
ATGTTATGATAAAGTATACTGTTGTACATAGACTTCAGTGCTATGCACTCTTAACTATCACACATCGTCTCTAACTAACTATCACAACTGGTCTTTTCCCCCCTTAAATGAATCTGTTCCGTGTCTCTGTCCATGTAGCCAagacctacatttacctgacCCTGTAGTCTAGTCCATTTGTGAGTCCCAATTATATGTATTTTCTCCAGAAGTGTGAATCCAAgtgtaaaagcattggattggtggaggcatgggcAAGAGGGATTTTCCACCATGTTTCCGACACAGaaccagtcatttcctttcaaatcagtgaagCCAAGTGAACACGTGCACGCTGCGGAGACAGGAGAGGTAAATTGATTTTGTCCGCTGTGCACGTCTCTGTCTGTGTGATCCCTGTATATTGACGcctctacagtaatacagtagcaTGCTTTTTTTGTATCCGACTCAATGTACATATTTACTCTCACTGGCGTAGGTGTTTTATACTGTTCCAAACAGCCTGTGATTGTGATGTCATCCTCTGGCAGAGCCAGTCAGCGTTCTGGCCCCACTGCAGCAGACTGTTGACATGACGTTCCACACGtccgtcatttagcagacgctcttatccagagccacttactcTTTAAGTATCTCTTTACTCACTTTATCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACACGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACATAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAGGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAGGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACACGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAAGCGTCCATTTGCTTTCAGATTAAACTCAGAAACCAGACCATCCACAGTCCACTACTAGTCAGAAGTGTAGAGCTCTGTCAGTAACATAAGAGgcctgttgagagagagaggggctgtggaTTTTAACACCCCTGTCCCATTTTAGCACCCCGTCACCGTCCCTGTACCCCTTAGAGACTCTTTAGCTCCATTTGCCCTCTGTGTGATCTCGATCCATTTAGAGGCCCTCTGTGTGAACTCGACCCATTTAGAGGTCCTCTGTGTGACCTCGATCCATTTAGAGGTCCTGTGTGTGAGCTCAATCCATTTAGAGGTCCTTTGTGTGATCTCAATCCATTTAGAGGTCCTCTGTGTGAATCTCAATCCATTTAGAGGTCCTCTCTGTGATCTCGATCCATTTAGAGGTCTTCTGTGTGATCTCGATCCATTTAGAGGTCCTCTGTGTGATCTCAATCCATTTAGAGGTCCTCTGTGTGATCTCAATCCATTTAGAGGTCCTCTGTGTGACCTCTACCCATTTAGAGGCCCTCTGTGTGATCTCGATCTATTTAGAGGTCCTCTGTGTGATCTCGACCCATTTAGAGGTCCTCTGTGTGATCTCGATCCATTTAGAGGTCCTCTGTGATCTCGACCCATTTAGAGGTCCTCTGTGTGATCTCAATCCATATATCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCCCTTCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCCCTCCAATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTC
>TU864251
ATGTTATGATAAAGTATACTGTTGTACATAGACTTCAGTGCTATGCACTCTTAACTATCACACATCGTCTCTAACTAACTATCACAACTGGTCTTTTCCCCCCTTAAATGAATCTGTTCCGTGTCTCTGTCCATGTAGCCAagacctacatttacctgacCCTGTAGTCTAGTCCATTTGTGAGTCCCAATTATATGTATTTTCTCCAGAAGTGTGAATCCAAgtgtaaaagcattggattggtggaggcatgggcAAGAGGGATTTTCCACCATGTTTCCGACACAGaaccagtcatttcctttcaaatcagtgaagCCAAGTGAACACGTGCACGCTGCGGAGACAGGAGAGGTAAATTGATTTTGTCCGCTGTGCACGTCTCTGTCTGTGTGATCCCTGTATATTGACGcctctacagtaatacagtagcaTGCTTTTTTTGTATCCGACTCAATGTACATATTTACTCTCACTGGCGTAGGTGTTTTATACTGTTCCAAACAGCCTGTGATTGTGATGTCATCCTCTGGCAGAGCCAGTCAGCGTTCTGGCCCCACTGCAGCAGACTGTTGACATGACGTTCCACACGtccgtcatttagcagacgctcttatccagagccacttactcTTTAAGTATCTCTTTACTCACTTTATCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACACGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACATAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAGGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAGGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACACGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGTAGCTGGTAATAAGACAAGTGAATGGCACGGCAAGCGTCCATTTGCTTTCAGATTAAACTCAGAAACCAGACCATCCACAGTCCACTACTAGTCAGAAGTGTAGAGCTCTGTCAGTAACATAAGAGgcctgttgagagagagaggggctgtggaTTTTAACACCCCTGTCCCATTTTAGCACCCCGTCACCGTCCCTGTACCCCTTAGAGACTCTTTAGCTCCATTTGCCCTCTGTGTGATCTCGATCCATTTAGAGGCCCTCTGTGTGAACTCGACCCATTTAGAGGTCCTCTGTGTGACCTCGATCCATTTAGAGGTCCTCTGTGTGACCTCTACCCATTTAGAGGCCCTCTGTGTGATCTCGATCTATTTAGAGGTCCTCTGTGATCTCGACCCATTTAGAGGTCCTCTGTGTGATCTCAATCCATATATCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCCCTTCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCCCTCGTGTGTAGCCTCCCTCCAATGTAGCCTCTCTCCTATGTAGCCTCCCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTCTCTCCTATGTAGCCTC

Function

NR:

description
adhesive plaque matrix protein-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU864249 False 2261 lncRNA 0.46 3 89435597 89438123
TU864250 False 2381 lncRNA 0.46 2 89435597 89438123
TU864251 True 2110 lncRNA 0.46 4 89435597 89438123

Neighbor

gene id symbol gene type direction distance location
LOC118965582 st6galnac5 coding downstream 27555 89352710 ~ 89408042 (-)
miga1 miga1 coding downstream 286902 89126468 ~ 89148695 (-)
LOC110530869 LOC106569754 coding downstream 362425 89065258 ~ 89073172 (-)
LOC110530871 dnajb4 coding downstream 375094 88991233 ~ 89060503 (-)
LOC110530883 LOC106569748 coding downstream 463788 88923723 ~ 88971809 (-)
LOC110530890 LOC106569838 coding upstream 151214 89589337 ~ 89634342 (-)
LOC118965584 LOC106592566 coding upstream 151216 89589339 ~ 89598617 (-)
LOC118965585 NA coding upstream 167824 89605947 ~ 89607379 (-)
LOC110530891 LOC106925954 coding upstream 199520 89637643 ~ 89707054 (-)
LOC110530894 LOC106569835 coding upstream 285611 89723665 ~ 89770006 (-)
G760308 NA non-coding downstream 1601 89432846 ~ 89433996 (-)
G760307 NA non-coding downstream 7209 89423125 ~ 89428388 (-)
G760338 NA non-coding downstream 24308 89410835 ~ 89411289 (-)
G760331 NA non-coding downstream 46253 89388859 ~ 89389344 (-)
G760329 NA non-coding downstream 55500 89379855 ~ 89380097 (-)
G760353 NA non-coding upstream 14626 89452749 ~ 89454455 (-)
G760354 NA non-coding upstream 20586 89458709 ~ 89496005 (-)
G760352 NA non-coding upstream 23444 89461567 ~ 89495173 (-)
G760358 NA non-coding upstream 99110 89537233 ~ 89537792 (-)
G760370 NA non-coding upstream 114050 89552173 ~ 89618610 (-)
G760306 NA other downstream 102821 89331281 ~ 89332776 (-)
G760192 LOC106569753 other downstream 333215 89099844 ~ 89102382 (-)
G760182 LOC106569755 other downstream 354252 89079298 ~ 89081345 (-)
G760165 NA other downstream 417618 89017049 ~ 89017979 (-)
G760362 NA other upstream 96500 89534623 ~ 89535353 (-)
G760971 NA other upstream 902689 90340812 ~ 90341303 (-)
G761034 NA other upstream 1212273 90635679 ~ 90652740 (-)
G761176 NA other upstream 1358024 90796147 ~ 90797574 (-)
G761467 NA other upstream 1508356 90946479 ~ 90948106 (-)

Expression


Co-expression Network