G759846


Basic Information

Item Value
gene id G759846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89590831 ~ 89605556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863549
TCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaagtcatttcattgaaatgacgtggaaacaacgctgattcaaccagtgtgtgcccagtgggctgtaATCAGCATAAATAGTGTGTCAATTAAGTTCAATAATGTATTGTTTTTGGACATTCACAACAGATGGTATAATAGTGTATTATAGGACTTTTCTCAAGAGGGGTATGTACGTATTCTGGACccgagtgtgtcagtgtagatatgTACTCAATCACTTCGGCACTGTTGAACTGAATCAACCAACTGAATCAGCCAACTGAATCCTACCAACTGAATCAACCAACTGAATCAACCAACTGAATCAGCCAACTGAATCCACATAATTGAATCAACCAACTGAATCAGCCCACTGAATCAACTGCAGTATGACTGTGAGAAGGTgctgattgagagagagacaatggactGTGTTACTGTATAACCTCCCTCATGTTGACAGTAATGTTGTACACTGAATTGACCGATACTCTGCGACAGCAAAGCAACGTATTGATCTATAGTAGAAATGGGTCCTGATGGCTGCTCTTCAACCCAACTCCCCTGCAGTACAGCACAGCTACTGGTCAGGTCCAGAAGGAAAGTCTTGATTCTTTCAGAGGAACTACTGCTAGTCCAGTTGGCTGTTTGTGAACACTACGGTGAGATGACTTTTCAGTCTAAAATGTTTGTTGTTCCAGTTGAGAGTTTTAAGATGCCTGAGTGAGTCCTGGAGAGGCCACAGAGTTAAACTATAATCCCTGAAGAGACAGGCTGGGTTCTGCAGTGGTTATTCACCCAGGGATAAGTGGGACTGGCTGGTCTCTACTACAGTAGGGTCCAGGTAACTCTGCCAACCGTAGTTCCTTAGTTGACCGTTGGTCTAGGCTGGTAAGAGTTGTCCTCGGAGATGTCCTGATCCTCGCTGCCCATCAGACCTGAGATGTAAGGCA
>TU863550
TCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGCCATTCAACATccattccatgttggttcaaaaCAAAAGCTGTTCTGATGACATGTCACCTCCCACTGGGCAGACGGccattcaacatctattccatgttggttcaaagtcatttcattgaaatgacgtggaaacaacgctgattcaaccagtgtgtgcccagtgggctgtaATCAGCATAAATAGTGTGTCAATTAAGTTCAATAATGTATTGTTTTTGGACATTCACAACAGATGGTATAATAGTGTATTATAGGACTTTTCTCAAGAGGGGTATGTACGTATTCTGGACccgagtgtgtcagtgtagatatgTACTCAATCACTTCGGCACTGTTGAACTGAATCAACCAACTGAATCAGCCAACTGAATCCACATAATTGAATCAACCAACTGAATCAGCCCTCTGAATCAACCGCAGTATGACTGTGAGAAGGTgctgattgagagagagacaatggactGTGTTACTGTATAACCTCCCTCATGTTGACAGTAATGTTGTACACTGAATTGACCGATACTCTGCGACAGCAAAGCAACGTATTGATCTATAGTAGAAATGGGTCCTGATGGCTGCTCTTCAACCCAACTCCCCTGCAGTACAGCACAGCTACTGGTCAGGTCCAGAAGGAAAGTCTTGATTCTTTCAGAGGAACTACTGCTAGTCCAGTTGGCTGTTTGTGAACACTACGGTGAGATGACTTTTCAGTCTAAAATGTTTGTTGTTCCAGTTGAGAGTTTTAAGATGCCTGAGTGAGTCCTGGAGAGGCCACAGAGTTAAACCCTATAATCCCTGAAGAGACAGGCTGGGTTCTGCAGTGGTTATTCACCCAGGGATAAGTGGGACTGGCTGGTCTCTACTACAGTAGGGTCCAGGTAACTCTGCCAACCGTAGTTCCTTAGTTGACCGTTGGTCTAGGCTGGTAAGAGTTGTCCTCGGAGATGTCCTGATCCTCGCTGCCCATCAGACCTGAGATGTAAGGCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU863549 False 1512 lncRNA 0.45 2 89590831 89605556
TU863550 True 1461 lncRNA 0.46 3 89590831 89605556

Neighbor

gene id symbol gene type direction distance location
LOC118965583 LOC106569839 coding upstream 15667 89560138 ~ 89659347 (+)
pigk pigk coding upstream 269278 89296952 ~ 89321553 (+)
LOC110530860 LOC106569749 coding upstream 299490 89225089 ~ 89291341 (+)
LOC118965581 NA coding upstream 326881 89261614 ~ 89263950 (+)
usp33 LOC106569751 coding upstream 367125 89148990 ~ 89223706 (+)
yipf1 yipf1 coding downstream 185354 89790910 ~ 89837790 (+)
zgc:113691 LOC106569840 coding downstream 247910 89853466 ~ 89854375 (+)
ndc1 ndc1 coding downstream 256265 89861821 ~ 89911594 (+)
best4 LOC106569841 coding downstream 311486 89917042 ~ 89932074 (+)
hectd3 hectd3 coding downstream 326652 89932208 ~ 89947643 (+)
G759813 NA non-coding upstream 87829 89497969 ~ 89503002 (+)
G759805 NA non-coding upstream 157432 89432857 ~ 89433399 (+)
G759798 NA non-coding upstream 172496 89416392 ~ 89418335 (+)
G759790 NA non-coding upstream 190984 89398232 ~ 89399847 (+)
G759785 NA non-coding upstream 205833 89384460 ~ 89384998 (+)
G759857 NA non-coding downstream 10407 89615963 ~ 89616763 (+)
G759862 NA non-coding downstream 16612 89622168 ~ 89622801 (+)
G759869 NA non-coding downstream 31277 89636833 ~ 89638330 (+)
G759873 LOC102202288 non-coding downstream 49223 89654779 ~ 89679102 (+)
G759884 NA non-coding downstream 82572 89688128 ~ 89688933 (+)
slc25a24l LOC106569755 other upstream 496437 89074624 ~ 89139486 (+)
G759598 NA other upstream 729003 88861079 ~ 88861828 (+)
G759556 NA other upstream 889412 88697974 ~ 88701419 (+)
G759031 LOC106569827 other upstream 1480531 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 1483884 88082021 ~ 88106947 (+)
G759892 NA other downstream 90864 89696420 ~ 89696907 (+)
G760623 NA other downstream 554714 90160270 ~ 90208959 (+)
G760718 NA other downstream 768531 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 1094739 90700188 ~ 90709778 (+)
ndufb3 ndufb3 other downstream 1131735 90737231 ~ 90743084 (+)

Expression


Co-expression Network