G759857



Basic Information


Item Value
gene id G759857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89615963 ~ 89616763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU863568
ggttTACGaatcggaatcggacgatattaactaaaaatgccaacatcggtaagGCAAAGCTGACGTCCATACCAATATAAACGTAGGTATATGACGTAATGATGCCACGTAAAATGTTGTTCTATACGTGGAACACAGCGTTCCTAACCtcgcccacaatgtctgctgtatggatcgagcagtCAACTGTTGCCATGTTTCCCAAaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU863568 True 208 lncRNA 0.43 2 89615963 89616763

Neighbor


gene id symbol gene type direction distance location
LOC118965583 LOC106569839 coding upstream 40799 89560138 ~ 89659347 (+)
pigk pigk coding upstream 294410 89296952 ~ 89321553 (+)
LOC110530860 LOC106569749 coding upstream 324622 89225089 ~ 89291341 (+)
LOC118965581 NA coding upstream 352013 89261614 ~ 89263950 (+)
usp33 LOC106569751 coding upstream 392257 89148990 ~ 89223706 (+)
yipf1 yipf1 coding downstream 174147 89790910 ~ 89837790 (+)
zgc:113691 LOC106569840 coding downstream 236703 89853466 ~ 89854375 (+)
ndc1 ndc1 coding downstream 245058 89861821 ~ 89911594 (+)
best4 LOC106569841 coding downstream 300279 89917042 ~ 89932074 (+)
hectd3 hectd3 coding downstream 315445 89932208 ~ 89947643 (+)
G759850 NA non-coding upstream 5293 89596814 ~ 89610670 (+)
G759847 NA non-coding upstream 7626 89594454 ~ 89608337 (+)
G759846 NA non-coding upstream 10407 89590831 ~ 89605556 (+)
G759845 NA non-coding upstream 11629 89589337 ~ 89604334 (+)
G759849 NA non-coding upstream 19233 89596452 ~ 89596730 (+)
G759862 NA non-coding downstream 5405 89622168 ~ 89622801 (+)
G759869 NA non-coding downstream 20070 89636833 ~ 89638330 (+)
G759873 LOC102202288 non-coding downstream 38016 89654779 ~ 89679102 (+)
G759884 NA non-coding downstream 71365 89688128 ~ 89688933 (+)
G759887 NA non-coding downstream 74786 89691549 ~ 89692102 (+)
slc25a24l LOC106569755 other upstream 521569 89074624 ~ 89139486 (+)
G759598 NA other upstream 754135 88861079 ~ 88861828 (+)
G759556 NA other upstream 914544 88697974 ~ 88701419 (+)
G759031 LOC106569827 other upstream 1505663 88109006 ~ 88110300 (+)
G759020 LOC106569827 other upstream 1509016 88082021 ~ 88106947 (+)
G759892 NA other downstream 79657 89696420 ~ 89696907 (+)
G760623 NA other downstream 543507 90160270 ~ 90208959 (+)
G760718 NA other downstream 757324 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 1083532 90700188 ~ 90709778 (+)
ndufb3 ndufb3 other downstream 1120528 90737231 ~ 90743084 (+)

Expression



Co-expression Network