Gene
RNA
| Item | Value |
|---|---|
| gene id | G759873 |
| gene name | LOC102202288 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 89654779 ~ 89679102 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: casein kinase I-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU863590 | False | 471 | lncRNA | 0.56 | 4 | 89654779 | 89679102 |
| TU863589 | True | 510 | lncRNA | 0.52 | 3 | 89655160 | 89668252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965583 | LOC106569839 | coding | upstream | 79615 | 89560138 ~ 89659347 (+) |
| pigk | pigk | coding | upstream | 333226 | 89296952 ~ 89321553 (+) |
| LOC110530860 | LOC106569749 | coding | upstream | 363438 | 89225089 ~ 89291341 (+) |
| LOC118965581 | NA | coding | upstream | 390829 | 89261614 ~ 89263950 (+) |
| usp33 | LOC106569751 | coding | upstream | 431073 | 89148990 ~ 89223706 (+) |
| yipf1 | yipf1 | coding | downstream | 111808 | 89790910 ~ 89837790 (+) |
| zgc:113691 | LOC106569840 | coding | downstream | 174364 | 89853466 ~ 89854375 (+) |
| ndc1 | ndc1 | coding | downstream | 182719 | 89861821 ~ 89911594 (+) |
| best4 | LOC106569841 | coding | downstream | 237940 | 89917042 ~ 89932074 (+) |
| hectd3 | hectd3 | coding | downstream | 253106 | 89932208 ~ 89947643 (+) |
| G759759 | NA | non-coding | upstream | 2284 | 89319821 ~ 89652495 (+) |
| G759869 | NA | non-coding | upstream | 16449 | 89636833 ~ 89638330 (+) |
| G759862 | NA | non-coding | upstream | 31978 | 89622168 ~ 89622801 (+) |
| G759857 | NA | non-coding | upstream | 38016 | 89615963 ~ 89616763 (+) |
| G759850 | NA | non-coding | upstream | 44109 | 89596814 ~ 89610670 (+) |
| G759884 | NA | non-coding | downstream | 9026 | 89688128 ~ 89688933 (+) |
| G759887 | NA | non-coding | downstream | 12447 | 89691549 ~ 89692102 (+) |
| G759901 | NA | non-coding | downstream | 34089 | 89713191 ~ 89713407 (+) |
| G759904 | NA | non-coding | downstream | 40423 | 89719525 ~ 89719885 (+) |
| G759905 | NA | non-coding | downstream | 44638 | 89723740 ~ 89724053 (+) |
| slc25a24l | LOC106569755 | other | upstream | 560385 | 89074624 ~ 89139486 (+) |
| G759598 | NA | other | upstream | 792951 | 88861079 ~ 88861828 (+) |
| G759556 | NA | other | upstream | 953360 | 88697974 ~ 88701419 (+) |
| G759031 | LOC106569827 | other | upstream | 1544479 | 88109006 ~ 88110300 (+) |
| G759020 | LOC106569827 | other | upstream | 1547832 | 88082021 ~ 88106947 (+) |
| G759892 | NA | other | downstream | 17318 | 89696420 ~ 89696907 (+) |
| G760623 | NA | other | downstream | 481168 | 90160270 ~ 90208959 (+) |
| G760718 | NA | other | downstream | 694985 | 90362653 ~ 90400472 (+) |
| LOC110530875 | rpl37a | other | downstream | 1021193 | 90700188 ~ 90709778 (+) |
| ndufb3 | ndufb3 | other | downstream | 1058189 | 90737231 ~ 90743084 (+) |
