G759950


Basic Information

Item Value
gene id G759950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89796843 ~ 89814341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU863700
cacaccacccaccgcttcccagtatattactcgctaatgtccagtccccAGTTAACAAAGTCGCTGAAATCAGTGCAAGAGTTACTTCCCAAAGAGATATCTGGGATTGGGATTCTGTTTCATAGAAACATGGCTAGCTTGGGACATGCTGTCAGAATCCGGATTTTCAGTGAATCGCtccgacaggaataaacatctctccggtaagacgaagggcgggggtgtaggtttcatgattaacgacaaTCATGGTGTAATTTTAGCAACATacaggaactcaagtccttttgttcacctgacctagaattcaaTAAGCATTTCGCTTCActggcaataacatctgctaaccaggtgtatgtgaccaatacaatttgatttgaatgttgtTAATCCACATAGCATAAAGTCCATGTCTTTCTGGTATGCCTCAGGTGCGCTTGATAATCTGAAAGGAAATTTATTGAATCTGTAGTATCCACTGTGTATGATGAATGTTGTCAGGTTTCTTGATTCTGAGGCTAGTTCAACTTGCCATGATCCTTTTTCGCATCCAGTTTTGCGAACACTTTCGCTCCTTGCAATGCTTGCAGTATACTGTCTACTGTGGGAACTTGGTGTCGTTCTCTATGACAGCTTTGTTCTCATAAGTCAGCACAAACTCTGACTTCTTTTGTCTTTCTTTGGAATGTGGAGAATATTGGAAATCCTTTCTGATCTTTGATTCACTTCTTGTATGATGTCATCATCTAATATCTAGTCCAGTTCTTGATTGACAGCTTCCAGCATTGGATAAGGAAACACATCTCAGGCCTTGAGCTACAGGGACTATTTGCTCATTCACCGTACCTTTTGTGAGCGTATCCACTGATATGTCCAAGTCCTTGGAAAAGGGACTCCTATTCCTGTGCTAGCTGCATGAATATGCCCGGTGATTGCTCTACTGAATTGACATTATCTCTTGTGCTCTGTATTTTCaagtcaaaacatattttccttcCTATCAATGCTTCTACGTTTCCTCTGAGCACCAATATCTGGTATGTCGATGCACTTTTATTCAAAAGTTCTGCTTTCAAATAACCTACACATTGTAGTGGAGTAGTCTGAGCAGAAACATAGCGCTTTTTCTTACTCTCTAAGTTCCATTCCTGCAAACGTTCTCTTGAACAGGGCTTCTCCGATGAAATTCCTTCCACTGACTGTATTAAGGATCATTTTCAGATATTGTCCATTGACTTGCACTGTTTCTTTTCCTTCCTGATAGATTGAATAGAGAAACTGGAGTCAGATTCAGGTTCCTTCACAGCTCTAACTGGGTTGTCACTTTTAGCTTTGTCTCTATTTATTTTTGTCACCTTGATTTTGTTCTTTTCAATGGTCTTTCTTTTCTCTACGGACCACAATGGACTGTTTTCTCTACGGACCAcaatggactgttctctctacggACCACAATGGACTGTTTTCTCTACGGACCACAATGGACTGTTTTCTCTACGGACCACAATGGTCTTTCTTTTCTCTACGGACCACAATGGACTGTTTTCTCTACGGAACAcaatggactgttctctctacagACCACAATGGACTGTTTTCTCTACGGAACACAATGGACTGTTTTCTCTACGGACCACAATGGACTGTTTTCTCTACGGAACACAATGGACTGTTTTCTCTACGGAACACAATTGACTGTTTTCTTACAGTTTAAGCATTTAGCTGTGTTGGTGCTTTTGTTTCCATTTCGTGCATTGCCTCTCCGTTTATTAGTATTTACACGTCCTCCAGTAAAATAACATGACTGTCTTTAGCCTTGCCAAAATGATCAGAAAGCACTTCTGATTCTGCCTGTGCTGCTTCAAATATTGTAGCAATGGTGAGATCACCTAGTAGTGTTAATCCTTCTGCCTGGAGAAATGAATCTCAGGCTTTTGTTTGCACATCTTTCCACTAGCTGCTCCCTCAACATGTCTGAGTCCAGAGCATCTCACATGACGTAGCCACTTCtcttgggcggcagggtagcctagtggttagagtgtagaggcggcagggtagcctagtggttagagtgtggaggcggcagggtagcctagtggttagagtgtagaggcagcagggtagcctactggttagagcgttggactagtatccggaaggttgcaagttcaaatccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttccaaggccgtcattgaaaataagaatttgttcttaactgacttgcctagtaaaataaaggtaaaataaataaaataaaaaaatgtattcacacAGCCATCGATAGTTTCTCTTAATGCATTCACACAGCCATCGATAGTTTCTCTTAATGCATTCACACAGCCATCGATAGTTTCTCTAAATGCATTCACACAGCCATCGATAGTTTCTCTTAATGCATTCATACAGGCATTGATAGTTCCACTTCTCTTAATGCATTCACACAGCCATCGATAGTTTCTGTTAATGTATTCACACAGCCATCGATagtttctgttaatgcattcacaCAGCCATCGATAGTTTCTCTTAATGCATTCACATAGCCATCGATAGTTTTGTCTCGATCCGGTGTTCTTTGTCTAAACTTGAGACTTTCCAACCCCACATTTCTCAGCGGTGTAAAGCATCAAGCACggctacggtttgcaaatgtACCTTTTTCTCCTGGTTGAAATAGATTCCACTTtaaacaaggtacacctgttaattgaaatgcattccaggtgactacctcatgaagctggttgagagaattccaagagtgtgtaaagctgtcatcaaggcaaagggtggctactttgaagaatctaaaatatattttgatttgtttaacactttgttgcttactacatgattccatatgtgttattacatagttttgatgtcttcactattgttctacaatgtagaaaatagaaaaaataaagaacccttgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU863700 True 2997 lncRNA 0.41 3 89796843 89814341

Neighbor

gene id symbol gene type direction distance location
LOC118965583 LOC106569839 coding upstream 221679 89560138 ~ 89659347 (+)
pigk pigk coding upstream 475290 89296952 ~ 89321553 (+)
LOC110530860 LOC106569749 coding upstream 505502 89225089 ~ 89291341 (+)
LOC118965581 NA coding upstream 532893 89261614 ~ 89263950 (+)
usp33 LOC106569751 coding upstream 573137 89148990 ~ 89223706 (+)
zgc:113691 LOC106569840 coding downstream 39125 89853466 ~ 89854375 (+)
ndc1 ndc1 coding downstream 47480 89861821 ~ 89911594 (+)
best4 LOC106569841 coding downstream 102701 89917042 ~ 89932074 (+)
hectd3 hectd3 coding downstream 117867 89932208 ~ 89947643 (+)
rps8a rs8 coding downstream 136770 89951111 ~ 89957717 (+)
G759937 NA non-coding upstream 21931 89773472 ~ 89774912 (+)
G759906 NA non-coding upstream 70556 89724812 ~ 89726287 (+)
G759905 NA non-coding upstream 72790 89723740 ~ 89724053 (+)
G759904 NA non-coding upstream 76958 89719525 ~ 89719885 (+)
G759901 NA non-coding upstream 83436 89713191 ~ 89713407 (+)
G759967 NA non-coding downstream 40518 89854859 ~ 89855189 (+)
G759970 NA non-coding downstream 43118 89857459 ~ 89857740 (+)
G759979 NA non-coding downstream 97528 89911869 ~ 89912304 (+)
G760491 NA non-coding downstream 100629 89914970 ~ 89915169 (+)
G760498 NA non-coding downstream 108719 89923060 ~ 89924400 (+)
G759892 NA other upstream 99936 89696420 ~ 89696907 (+)
slc25a24l LOC106569755 other upstream 702449 89074624 ~ 89139486 (+)
G759598 NA other upstream 935015 88861079 ~ 88861828 (+)
G759556 NA other upstream 1095424 88697974 ~ 88701419 (+)
G760623 NA other downstream 345929 90160270 ~ 90208959 (+)
G760718 NA other downstream 559746 90362653 ~ 90400472 (+)
LOC110530875 rpl37a other downstream 885954 90700188 ~ 90709778 (+)
ndufb3 ndufb3 other downstream 922950 90737231 ~ 90743084 (+)
G760857 NA other downstream 955776 90770117 ~ 90771037 (+)

Expression


Co-expression Network