Item | Value |
---|---|
gene id | XLOC_026555 |
gene name | ighv5-8 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 34080570 ~ 34081023 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
ighv5-8 | Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. |
id | name | namespace |
---|---|---|
GO:0045087 | innate immune response | biological_process |
GO:0050871 | positive regulation of B cell activation | biological_process |
GO:0006910 | phagocytosis, recognition | biological_process |
GO:0006911 | phagocytosis, engulfment | biological_process |
GO:0042742 | defense response to bacterium | biological_process |
GO:0006958 | complement activation, classical pathway | biological_process |
GO:0050853 | B cell receptor signaling pathway | biological_process |
GO:0009897 | external side of plasma membrane | cellular_component |
GO:0042571 | immunoglobulin complex, circulating | cellular_component |
GO:0034987 | immunoglobulin receptor binding | molecular_function |
GO:0003823 | antigen binding | molecular_function |
id | description |
---|---|
ZDB-GENE-040514-22 | Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. |
ensembl_id | ENSDARG00000096318 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00051736 | True | 369 | mRNA | 0.45 | 2 | 34080570 | 34081023 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_026553 | ighv6-2 | coding | downstream | 2391 | 34074278 ~ 34078179 (-) |
XLOC_026554 | ighv7-1 | coding | downstream | 3763 | 34076378 ~ 34076807 (-) |
XLOC_026552 | ighv8-2 | coding | downstream | 8124 | 34072012 ~ 34072446 (-) |
XLOC_026551 | ighv8-3 | coding | downstream | 10119 | 34070022 ~ 34070451 (-) |
XLOC_026550 | ighv9-1 | coding | downstream | 10933 | 34069166 ~ 34069637 (-) |
XLOC_026556 | ighv4-3 | coding | upstream | 828 | 34081851 ~ 34084387 (-) |
XLOC_026557 | ighv4-9 | coding | upstream | 3838 | 34084861 ~ 34085336 (-) |
XLOC_026558 | BX649502.11 | coding | upstream | 5018 | 34086041 ~ 34086483 (-) |
XLOC_026559 | ighv4-8 | coding | upstream | 5925 | 34086948 ~ 34087394 (-) |
XLOC_026560 | ighv4-7 | coding | upstream | 8960 | 34089983 ~ 34090456 (-) |
XLOC_026547 | BX649502.5 | non-coding | downstream | 15634 | 34063955 ~ 34064936 (-) |
XLOC_026544 | BX649502.10 | non-coding | downstream | 21853 | 34058679 ~ 34058717 (-) |
XLOC_026539 | BX649502.4 | non-coding | downstream | 31917 | 34048205 ~ 34048653 (-) |
XLOC_026538 | BX649502.6 | non-coding | downstream | 32954 | 34047179 ~ 34047616 (-) |
XLOC_026534 | BX649502.8 | non-coding | downstream | 44939 | 34035192 ~ 34035631 (-) |
XLOC_026572 | NA | non-coding | upstream | 58614 | 34139637 ~ 34141181 (-) |
XLOC_026580 | NA | non-coding | upstream | 560025 | 34641048 ~ 34641973 (-) |
XLOC_026585 | NA | non-coding | upstream | 866379 | 34947402 ~ 34948061 (-) |
XLOC_026588 | NA | non-coding | upstream | 1484105 | 35565128 ~ 35574451 (-) |