XLOC_026558 (BX649502.11)



Basic Information


Item Value
gene id XLOC_026558
gene name BX649502.11
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34086041 ~ 34086483 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00051740
atgatctcttcATCTGTAGTGCTGGTTCTGGCAGTAGTATTCTGTGTTGATTTATATGAACTCACTCAGTCTGAGTCTCTGACTGTCCGTCCTGATGACTCTCTCACTATCAACTGCAGAGTCTCATATTCAGTCACTAGTGAACACACAGCCTGGATTCGTCAGCCTGCAGGAAAAGCTCTGGAGTGGATTGGTGTTATCTACTCTTTTGGAGGCTTAGATACAAGGATTCTCTGCAAAGCAAGTTCAGCATCACCAGAGACACTTCCAGTAACACAATAACACTGCAAGGAAAGAATGTGAAAGCTGAAGACACAGCTGTGTATTATTGTGCCAGACA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095205

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00051740 True 340 IG_V_pseudogene 0.44 2 34086041 34086483

Neighbor


gene id symbol gene type direction distance location
XLOC_026557 ighv4-9 coding downstream 705 34084861 ~ 34085336 (-)
XLOC_026556 ighv4-3 coding downstream 1654 34081851 ~ 34084387 (-)
XLOC_026555 ighv5-8 coding downstream 5018 34080570 ~ 34081023 (-)
XLOC_026553 ighv6-2 coding downstream 7862 34074278 ~ 34078179 (-)
XLOC_026554 ighv7-1 coding downstream 9234 34076378 ~ 34076807 (-)
XLOC_026559 ighv4-8 coding upstream 465 34086948 ~ 34087394 (-)
XLOC_026560 ighv4-7 coding upstream 3500 34089983 ~ 34090456 (-)
XLOC_026561 si:dkey-204f11.13 coding upstream 4817 34091300 ~ 34091356 (-)
XLOC_026562 ighv4-6 coding upstream 5975 34092458 ~ 34092914 (-)
XLOC_026563 ighv6-1 coding upstream 9031 34095514 ~ 34103365 (-)
XLOC_026547 BX649502.5 non-coding downstream 21105 34063955 ~ 34064936 (-)
XLOC_026544 BX649502.10 non-coding downstream 27324 34058679 ~ 34058717 (-)
XLOC_026539 BX649502.4 non-coding downstream 37388 34048205 ~ 34048653 (-)
XLOC_026538 BX649502.6 non-coding downstream 38425 34047179 ~ 34047616 (-)
XLOC_026534 BX649502.8 non-coding downstream 50410 34035192 ~ 34035631 (-)
XLOC_026572 NA non-coding upstream 53154 34139637 ~ 34141181 (-)
XLOC_026580 NA non-coding upstream 554565 34641048 ~ 34641973 (-)
XLOC_026585 NA non-coding upstream 860919 34947402 ~ 34948061 (-)
XLOC_026588 NA non-coding upstream 1478645 35565128 ~ 35574451 (-)
XLOC_026600 NA non-coding upstream 2233756 36320239 ~ 36323625 (-)

Expression



Co-expression Network