G760987



Basic Information


Item Value
gene id G760987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90371594 ~ 90372807 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU865180
attgttggttaagggcttgtaagtaagcattttaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcaacatttcactgtaaagtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatctcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgcattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgcattcagcatttcactgtaaggtctactacacctgttgtattcagcacatgtgacaaataacatttgatttgatttgatcaaccacatggaaacgtTTTATGTgtatgataccattccactgactgAGCcttcttcccctcagcagcctccactggaatCTATATATGCCTTTATTTCATAGAGGACAGGTCTATATATCCACAGGCACTTTCTACTCCAGCCATTCCATTCACTGCAATGCAATCCATTGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU865180 True 799 lncRNA 0.40 2 90371594 90372807
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110531063 LOC106591048 coding downstream 7390 90301067 ~ 90364204 (-)
LOC118965587 NA coding downstream 557338 89809305 ~ 89814256 (-)
LOC118965586 NA coding downstream 567657 89800462 ~ 89803937 (-)
LOC110530892 LOC106569833 coding downstream 579895 89773615 ~ 89791699 (-)
LOC110530894 LOC106569835 coding downstream 601588 89723665 ~ 89770006 (-)
orc2 orc2 coding upstream 304434 90677241 ~ 90694420 (-)
LOC110530878 LOC106569723 coding upstream 388552 90761359 ~ 90779222 (-)
bag1 LOC106569734 coding upstream 580185 90952992 ~ 90972453 (-)
LOC110512221 chmp5 coding upstream 611775 90984582 ~ 91010533 (-)
oprk1 LOC105007147 coding upstream 673233 91046040 ~ 91058874 (-)
G760968 NA non-coding downstream 33105 90337215 ~ 90338489 (-)
G760947 NA non-coding downstream 82841 90288046 ~ 90288753 (-)
G760949 NA non-coding downstream 86487 90284371 ~ 90285107 (-)
G760927 NA non-coding downstream 114139 90256053 ~ 90257455 (-)
G760916 NA non-coding downstream 127137 90243204 ~ 90244457 (-)
G760990 NA non-coding upstream 7691 90380498 ~ 90380812 (-)
G760995 NA non-coding upstream 29167 90401974 ~ 90403783 (-)
G761048 NA non-coding upstream 118853 90491660 ~ 90504235 (-)
G761061 NA non-coding upstream 145640 90518447 ~ 90519380 (-)
G761037 NA non-coding upstream 173454 90546261 ~ 90548145 (-)
G760971 NA other downstream 30291 90340812 ~ 90341303 (-)
G760362 NA other downstream 836241 89534623 ~ 89535353 (-)
LOC118965582 st6galnac5 other downstream 964092 89352710 ~ 89408042 (-)
G760306 NA other downstream 1038818 89331281 ~ 89332776 (-)
G760192 LOC106569753 other downstream 1269212 89099844 ~ 89102382 (-)
G761034 NA other upstream 277589 90635679 ~ 90652740 (-)
G761176 NA other upstream 423340 90796147 ~ 90797574 (-)
G761467 NA other upstream 573672 90946479 ~ 90948106 (-)
G761504 NA other upstream 682940 91055747 ~ 91111937 (-)
G761604 NA other upstream 888272 91261079 ~ 91272370 (-)

Expression


G760987 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G760987 Expression in each Bioproject

Bar chart with 19 bars.
G760987 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network