Gene
RNA
| Item | Value |
|---|---|
| gene id | G761034 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 90635679 ~ 90652740 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| collagen alpha-2(VI) chain-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU865238 | False | 703 | lncRNA | 0.50 | 2 | 90635679 | 90652740 |
| TU865237 | True | 1362 | TUCP | 0.47 | 2 | 90650396 | 90652740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531063 | LOC106591048 | coding | downstream | 271475 | 90301067 ~ 90364204 (-) |
| LOC118965587 | NA | coding | downstream | 821423 | 89809305 ~ 89814256 (-) |
| LOC118965586 | NA | coding | downstream | 831742 | 89800462 ~ 89803937 (-) |
| LOC110530892 | LOC106569833 | coding | downstream | 843980 | 89773615 ~ 89791699 (-) |
| LOC110530894 | LOC106569835 | coding | downstream | 865673 | 89723665 ~ 89770006 (-) |
| orc2 | orc2 | coding | upstream | 24501 | 90677241 ~ 90694420 (-) |
| LOC110530878 | LOC106569723 | coding | upstream | 108619 | 90761359 ~ 90779222 (-) |
| bag1 | LOC106569734 | coding | upstream | 300252 | 90952992 ~ 90972453 (-) |
| LOC110512221 | chmp5 | coding | upstream | 331842 | 90984582 ~ 91010533 (-) |
| oprk1 | LOC105007147 | coding | upstream | 393300 | 91046040 ~ 91058874 (-) |
| G761037 | NA | non-coding | downstream | 87534 | 90546261 ~ 90548145 (-) |
| G761061 | NA | non-coding | downstream | 116299 | 90518447 ~ 90519380 (-) |
| G761048 | NA | non-coding | downstream | 131444 | 90491660 ~ 90504235 (-) |
| G760995 | NA | non-coding | downstream | 231896 | 90401974 ~ 90403783 (-) |
| G760990 | NA | non-coding | downstream | 254867 | 90380498 ~ 90380812 (-) |
| G761108 | NA | non-coding | upstream | 1077 | 90653817 ~ 90654089 (-) |
| G761110 | NA | non-coding | upstream | 2149 | 90654889 ~ 90655429 (-) |
| G761121 | NA | non-coding | upstream | 5164 | 90657904 ~ 90658157 (-) |
| G761099 | LOC106569720 | non-coding | upstream | 10175 | 90662915 ~ 90663267 (-) |
| G761123 | NA | non-coding | upstream | 12822 | 90665562 ~ 90666174 (-) |
| G760971 | NA | other | downstream | 294376 | 90340812 ~ 90341303 (-) |
| G760362 | NA | other | downstream | 1100326 | 89534623 ~ 89535353 (-) |
| LOC118965582 | st6galnac5 | other | downstream | 1228177 | 89352710 ~ 89408042 (-) |
| G760306 | NA | other | downstream | 1302903 | 89331281 ~ 89332776 (-) |
| G760192 | LOC106569753 | other | downstream | 1533297 | 89099844 ~ 89102382 (-) |
| G761176 | NA | other | upstream | 143407 | 90796147 ~ 90797574 (-) |
| G761467 | NA | other | upstream | 293739 | 90946479 ~ 90948106 (-) |
| G761504 | NA | other | upstream | 403007 | 91055747 ~ 91111937 (-) |
| G761604 | NA | other | upstream | 608339 | 91261079 ~ 91272370 (-) |
| G760975 | NA | non-coding | downstream | 249922 | 90362304 ~ 90400474 (-) |
