Item | Value |
---|---|
gene id | XLOC_026562 |
gene name | ighv4-6 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 34092458 ~ 34092914 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
ighv4-6 | Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. |
id | name | namespace |
---|---|---|
GO:0045087 | innate immune response | biological_process |
GO:0050871 | positive regulation of B cell activation | biological_process |
GO:0006910 | phagocytosis, recognition | biological_process |
GO:0006911 | phagocytosis, engulfment | biological_process |
GO:0042742 | defense response to bacterium | biological_process |
GO:0006958 | complement activation, classical pathway | biological_process |
GO:0050853 | B cell receptor signaling pathway | biological_process |
GO:0009897 | external side of plasma membrane | cellular_component |
GO:0042571 | immunoglobulin complex, circulating | cellular_component |
GO:0034987 | immunoglobulin receptor binding | molecular_function |
GO:0003823 | antigen binding | molecular_function |
id | description |
---|---|
ZDB-GENE-030924-7 | Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane. |
ensembl_id | ENSDARG00000096333 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00051745 | True | 380 | mRNA | 0.43 | 2 | 34092458 | 34092914 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_026561 | si:dkey-204f11.13 | coding | downstream | 1102 | 34091300 ~ 34091356 (-) |
XLOC_026560 | ighv4-7 | coding | downstream | 2002 | 34089983 ~ 34090456 (-) |
XLOC_026559 | ighv4-8 | coding | downstream | 5064 | 34086948 ~ 34087394 (-) |
XLOC_026558 | BX649502.11 | coding | downstream | 5975 | 34086041 ~ 34086483 (-) |
XLOC_026557 | ighv4-9 | coding | downstream | 7122 | 34084861 ~ 34085336 (-) |
XLOC_026563 | ighv6-1 | coding | upstream | 2600 | 34095514 ~ 34103365 (-) |
XLOC_026564 | ighv4-5 | coding | upstream | 3599 | 34096513 ~ 34096987 (-) |
XLOC_026565 | ighv5-3 | coding | upstream | 5345 | 34098259 ~ 34098731 (-) |
XLOC_026566 | ighv5-2 | coding | upstream | 8717 | 34101631 ~ 34102075 (-) |
XLOC_026567 | ighv5-1 | coding | upstream | 13132 | 34106046 ~ 34106471 (-) |
XLOC_026547 | BX649502.5 | non-coding | downstream | 27522 | 34063955 ~ 34064936 (-) |
XLOC_026544 | BX649502.10 | non-coding | downstream | 33741 | 34058679 ~ 34058717 (-) |
XLOC_026539 | BX649502.4 | non-coding | downstream | 43805 | 34048205 ~ 34048653 (-) |
XLOC_026538 | BX649502.6 | non-coding | downstream | 44842 | 34047179 ~ 34047616 (-) |
XLOC_026572 | NA | non-coding | upstream | 46723 | 34139637 ~ 34141181 (-) |
XLOC_026580 | NA | non-coding | upstream | 548134 | 34641048 ~ 34641973 (-) |
XLOC_026585 | NA | non-coding | upstream | 854488 | 34947402 ~ 34948061 (-) |
XLOC_026588 | NA | non-coding | upstream | 1472214 | 35565128 ~ 35574451 (-) |
XLOC_026600 | NA | non-coding | upstream | 2227325 | 36320239 ~ 36323625 (-) |