G760872


Basic Information

Item Value
gene id G760872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90730990 ~ 90732388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU864997
gttctaacggtctctccctccctctctctctgtgtgtactgacagtctctctctccctccctctctctctctctgtgttctgacggtctctccctctccctctctctgtgtgtgttctgacggtctctccctcgctctctctctgtgtgtactgacggtctctccctctctctctgtgtgtgttctgacggtctctccctccctctcgctctgtgtgtcctgacggtctctctccctccctctctctctttctgtgtgtactgatggtctctccctctctctctgtgtgtcctgacggtctctctccctccctccctctctctctgtgtgttctgacggtctctctccctctctctctctctgtgtgtcctgacggtccctccctctctctctctgtgtgtcctgacggtcccttcctctctgtctctgtgtgtactgacggtctctccctctccctctctcgctgtgtgtcctgacggtctctctccctccctctctctctctctgtgtgtactgacggtctctccctctccctctctctctgtgtgtcctgacggtctctctccctccctctctctctctctctgtgtattgacggtctccctccctctctctctgtgtgtgttctgacggtctctccctttccctctctctctgtgtgtcctgacggtctctcttcctccctctctctctccctcgctctgtgtGTACTgacggtctctccctctccctctctctctgtgtgtactgacggtctctctcccttcctctctctctgtgtgtgtcctgacggtctctctccctccctctctctctctgtgtgtactgacggtctctccctctccctctctctgtgtgcactaacggtctctttccctccctctctctctctgtgtgtcctgacggtctctctccctccctctctctctttctgtgtgtactgacggtctctccctcttcttctctctctgtgtgtcctgacggtctctctccctccctctctctctctctgtgtgtactgatggtctctccctctctctctgtgtgtactgacggtctctccctctccctctgtgtgtcctgacggtctctccctctctctctgtgtgtactgacggtctctccctctctctctgtgtgtactgacggtctctgtctctccctctctctctgtgtgtactgacggtctctctccctccctctttctgtgtgtgtgtgtactgacggtctctccctctccctctctctctgtgtgtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU864997 True 1258 lncRNA 0.56 3 90730990 90732388

Neighbor

gene id symbol gene type direction distance location
LOC110530875 rpl37a coding upstream 21212 90700188 ~ 90709778 (+)
zgc:162816 LOC106569720 coding upstream 56126 90658311 ~ 90674864 (+)
LOC110531056 LOC106591834 coding upstream 78285 90591990 ~ 90652705 (+)
LOC110517228 LOC106597294 coding upstream 185732 90439800 ~ 90545258 (+)
LOC118965588 NA coding upstream 330517 90398599 ~ 90400473 (+)
ndufb3 ndufb3 coding downstream 4843 90737231 ~ 90743084 (+)
LOC110530867 LOC106569722 coding downstream 46735 90779123 ~ 90796938 (+)
LOC110530865 LOC106595329 coding downstream 67600 90799988 ~ 90830525 (+)
LOC110530903 LOC106569743 coding downstream 181385 90913773 ~ 90916737 (+)
rgs20 LOC106592360 coding downstream 507498 91239886 ~ 91260968 (+)
G760871 NA non-coding upstream 1449 90728529 ~ 90729541 (+)
G760844 NA non-coding upstream 37946 90692425 ~ 90693044 (+)
G760837 NA non-coding upstream 69477 90661231 ~ 90661513 (+)
G760832 NA non-coding upstream 72872 90657807 ~ 90658118 (+)
G760817 NA non-coding upstream 131206 90599041 ~ 90599784 (+)
G760886 NA non-coding downstream 72752 90805140 ~ 90805628 (+)
G760887 NA non-coding downstream 73242 90805630 ~ 90862789 (+)
G760892 NA non-coding downstream 86287 90818675 ~ 90824470 (+)
G760894 NA non-coding downstream 98553 90830941 ~ 90831758 (+)
G761221 NA non-coding downstream 145907 90878295 ~ 90878639 (+)
G760718 NA other upstream 330518 90362653 ~ 90400472 (+)
G760623 NA other upstream 522031 90160270 ~ 90208959 (+)
G759892 NA other upstream 1034083 89696420 ~ 89696907 (+)
LOC118965583 LOC106569839 other upstream 1071643 89560138 ~ 89659347 (+)
G760857 NA other downstream 37729 90770117 ~ 90771037 (+)
G761244 LOC106569734 other downstream 220604 90952992 ~ 90972563 (+)
G761280 NA other downstream 287150 91007569 ~ 91040568 (+)
G761291 NA other downstream 368931 91101319 ~ 91104154 (+)

Expression


Co-expression Network