G761291


Basic Information

Item Value
gene id G761291
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 91101319 ~ 91104154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU865588
ACCTTCTAGATTACACTTTATTGGAATGCATACTCATGTTTAACACACAAGTAACTTTATCACTTTTACATTTATCCCAACATcaagaccagaggagaggaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagagaccagaggagaggagaagaggagaccagagaagaggagaccagaggagaagagaccagaggagaggagaccagaggagaagaggagaacagaccagaggagaagaggagaacagaccagaggagaggaggagagGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGAcaagaccagaggagaggagaccagaggacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcaGCCAACTACATGTCTGTATGACCCAGACACCCAATAGGTTTCATACAGGGTTCAGGGGTTAAGAGTTCAGCTTCTGGCGGCCATGGCCTGTTGTCAGGGGTTAGAGTTCAGGTCCTAACGGCCACAGCctgttgctgctgctggtcaGATGACTGAAGCTGCTTCCCCAGGTACTCCCTGCAGAGGACAGGAGAACGTTCAATCACACACAATGTAGCTTCCAGGTACtccctggagaggagagggcagaggtcAATCAATAAGGCATTCTAAACGGAACAAAAACATGACATTTAAAttcctattttatttatttatttcacctttatttaaccaagtaggccacttgagaactagttctcatttacaactgagacctggccaagataaagcaaagcagtgcgacataaacaacaacacagtgttacacatggaataaacaaacatacagtcaataacaaaatagaaaagtctatatacagtgtgtgcaaatgaagtaaga
>TU865584
gaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaggagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagatgaggagaggagaccagatcagaggagaggagaggagatcagaggagaagaggagaccagaggagaagaggagaccagaggagaagaggagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagagg
>TU865585
gaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaggagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaggagaccagaggagaggagaagaggagaccagagaagaggagaccagaggagaacagaccagaggaggagaggagaggagaagaggagaccagagaagaggagaccagaggagaggagaccagaggagaagaggagaacagaccagaggagaggaggagaggagaccagaggagaggagaccagaggagacgaGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGAcaagaccagaggagaggagaccagaggacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcaGCCAACTACATGTCTGTATGACCCAGACACCCAATAGGTTTCATACAGGGTTCAGGGGTTAAGAGTTCAGCTTCTGGCGGCCATGGCCTGTTGTCAGGGGTTAGAGTTCAGGTCCTAACGGCCACAGCctgttgctgctgctggtcaGATGACTGAA
>TU865587
gaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaggagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggaggaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagatgaggagaggagaccagatcagaggagaggagaggagatcagaggagaagaggagaccagaggagaagaggagaccagaggagaagaggagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagagg
>TU865590
gaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaggagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaggagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagatgaggagaggagagaccagaggagaagaggagaacagaccagaggagaagaggagaacagaccagaggagaggaggagaggagaccagaggagacgaGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGAcaagaccagaggagaggagaccagaggacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcaGCCAACTACATGTCTGTATGACCCAGACACCCAATAGGTTTCATACAGGGTTCAGGGGTTAAGAGTTCAGCTTCTGGCGGCCATGGCCTGTTGTCAGGGGTTAGAGTTCAGGTCCTAACGGCCACAGCctgttgctgctgctggtcaGATGACTGAA
>TU865591
gaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagatgaggagaggagagaccagaggagaagaggagaacagaccagaggagaagaggagaacagaccagaggagaggaggagaggagaccagaggagacgaGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGAcaagaccagaggagaggagaccagaggacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcaGCCAACTACATGTCTGTATGACCCAGACACCCAATAGGTTTCATACAGGGTTCAGGGGTTAAGAGTTCAGCTTCTGGCGGCCATGGCCTGTTGTCAGGGGTTAGAGTTCAGGTCCTAACGGCCACAGCctgttgctgctgctggtcaGATGACTGAA
>TU865596
gaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaggatgagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagaccagaggagaggaggagaggagactagaggagaggaggagaggagatcagaggagaggagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagagaccagaggagaagaggagaacagaccagaggaggagaggagaggagaagaggagaccagagaagaggagaccagaggagaggagaccagaggagaagaggagaacagaccagaggagaagaggagaacagaccagaggagaggaggagaggaGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGAcaagaccagaggagaggagaccagaggacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcaGCCAACTACATGTCTGTATGACCCAGACACCCAATAGGTTTCATACAGGGTTCAGGGGTTAAGAGTTCAGCTTCTGGCGGCCATGGCCTGTTGTCAGGGGTTAGAGTTCAGGTCCTAACGGCCACAGCctgttgctgctgctggtcaGATGACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU865588 False 986 TUCP 0.47 4 91101319 91104154
TU865584 False 669 TUCP 0.53 2 91101569 91102632
TU865585 False 904 TUCP 0.55 3 91101569 91103809
TU865587 False 794 TUCP 0.53 2 91101569 91102632
TU865590 False 1273 TUCP 0.54 3 91101569 91103809
TU865591 False 871 TUCP 0.54 4 91101569 91103809
TU865596 True 837 TUCP 0.55 3 91101569 91103809

Neighbor

gene id symbol gene type direction distance location
LOC110530903 LOC106569743 coding upstream 184582 90913773 ~ 90916737 (+)
LOC110530865 LOC106595329 coding upstream 270794 90799988 ~ 90830525 (+)
LOC110530867 LOC106569722 coding upstream 304381 90779123 ~ 90796938 (+)
ndufb3 ndufb3 coding upstream 358235 90737231 ~ 90743084 (+)
pecr pecr coding upstream 365206 90721147 ~ 90736113 (+)
rgs20 LOC106592360 coding downstream 135732 91239886 ~ 91260968 (+)
G761300 NA non-coding upstream 39328 91060052 ~ 91061991 (+)
G761280 NA non-coding upstream 60751 91007569 ~ 91040568 (+)
G761275 NA non-coding upstream 104099 90996431 ~ 90997220 (+)
G761268 NA non-coding upstream 114030 90984294 ~ 90987289 (+)
G761244 LOC106569734 non-coding upstream 146180 90952992 ~ 90972563 (+)
G761352 vath non-coding downstream 86166 91190320 ~ 91201574 (+)
G761375 NA non-coding downstream 125438 91229592 ~ 91230793 (+)
G761382 NA non-coding downstream 139157 91243311 ~ 91244141 (+)
G761385 NA non-coding downstream 144096 91248250 ~ 91249100 (+)
G761388 NA non-coding downstream 148728 91252882 ~ 91253238 (+)
G760857 NA other upstream 330282 90770117 ~ 90771037 (+)
LOC110530875 rpl37a other upstream 391667 90700188 ~ 90709778 (+)
G761750 NA other downstream 459919 91564073 ~ 91567098 (+)

Expression


Co-expression Network