LOC118966147 (LOC106589966)



Basic Information


Item Value
gene id LOC118966147
gene name LOC106589966
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 1403901 ~ 1482862 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036989222.1
ATGAGAGAACTGACACCACTCTGCTGGCAGCTCTtgctgTTGAGTACTCTGGTATACTGTAGCCTCGGACAAGGTGGAGCCTCTCTGAGTGTCAGTCCTGACAGATCTCAGTTCTTTGAATTtgagtctgtctctctgggcTGTGAGGTTCAGGGGAACTCTACTGGATGGAGAGTGGTGAGGAACGCAGAGAGGGGGAATGTTTCAGAGTGTAATACTGACTGGGGAAAACAACAAGGGCCTTCATGCATCGTGTCACTAATACCATCATCCAGTGGAGTGTACTGGTGTGAGTCTGGGTCTGGAGAACACAGCAATGCTGTCAACATCACAGTACATGctggagctgtgatcctggagagccctgcccttcctgtgactgagggagattcTGTGACTCTGCGCTGCAGATATAAGAGAACTCCCTCTGACCTCACAGCTGTTTTCTACAAAGATGGATCCCTCATCAGAGCTGAGTCTTCAGGAGAGATGACCATCCCTGCAGTATCCAAGTCAGATGAAGGACTCTACAAGTGTTCCAGCTCGAAAGGAGAATCACCAGAAAGCTGGATGACTGTGACAGCcttgtcctag

Function


NR:

description
low affinity immunoglobulin gamma Fc region receptor II-b-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036989222.1 True 594 mRNA 0.50 5 1403901 1482862

Neighbor


gene id symbol gene type direction distance location
LOC118965952 NA coding downstream 40639 1301207 ~ 1363262 (-)
LOC118966146 NA coding downstream 104342 1124821 ~ 1299559 (-)
LOC118965954 NA coding downstream 345892 1057167 ~ 1058009 (-)
LOC118965961 NA coding downstream 347639 1055159 ~ 1056262 (-)
LOC118965960 NA coding downstream 349943 1053253 ~ 1053958 (-)
LOC110515190 NA coding upstream 159272 1642134 ~ 1737538 (-)
LOC110517376 LOC106589966 coding upstream 261781 1744643 ~ 1778465 (-)
LOC118965956 NA coding upstream 485713 1968575 ~ 1980887 (-)
LOC118965962 NA coding upstream 587059 2069921 ~ 2074891 (-)
LOC118965963 NA coding upstream 600400 1947567 ~ 2084414 (-)
G763384 NA non-coding downstream 42046 1360487 ~ 1361855 (-)
G763381 NA non-coding downstream 47258 1355854 ~ 1356643 (-)
G763339 NA non-coding downstream 103849 1299724 ~ 1300052 (-)
G763353 NA non-coding downstream 104700 1245901 ~ 1299201 (-)
G763361 NA non-coding downstream 113953 1286854 ~ 1289948 (-)
G763437 NA non-coding upstream 34786 1517648 ~ 1523301 (-)
G763447 NA non-coding upstream 94614 1577476 ~ 1577951 (-)
G763472 LOC106589966 non-coding upstream 132217 1615079 ~ 1619544 (-)
G763474 NA non-coding upstream 134763 1617625 ~ 1618310 (-)
G763482 NA non-coding upstream 155682 1638544 ~ 1640774 (-)
G762459 NA other downstream 537469 861374 ~ 866432 (-)
G762118 NA other downstream 967401 429600 ~ 436500 (-)
G762116 NA other downstream 1105382 293672 ~ 298519 (-)
G762179 NA other downstream 1111616 290345 ~ 292285 (-)
G761802 LOC106562215 other downstream 1378394 25142 ~ 25507 (-)
G763587 NA other upstream 480111 1962973 ~ 1978231 (-)
G763719 NA other upstream 990236 2473098 ~ 2486901 (-)
G763961 NA other upstream 1813440 3286243 ~ 3299103 (-)
LOC110498423 LOC105006500 other upstream 2369109 3851852 ~ 3901549 (-)
LOC118966151 LOC106587785 other upstream 2530972 4012152 ~ 4033537 (-)

Expression



Co-expression Network