LOC110518027 (LOC106599962)


Basic Information

Item Value
gene id LOC110518027
gene name LOC106599962
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 2727465 ~ 2788437 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987040.1
AAATGGGGAAAACCACAAGGGTCTTCATGCATCGTGTCACTAATACCATCAGACAGTGGAGTGTACTGGTGTGAGTCTGGGTCTGGAAAACACAGCAACGCTGTCAACATCACAGTACATGctggagctgtgatcctggagagccctgcccttcctgtgactgagggagattcTGTGACTCTGCGCTGCAGATATCAGGTAACTCTCTCTAACCTCACAGCTGATTTCTACAAAGATGGAATCCTCATCAGGAATGTGACTACAGGAGAGATGACCATCCCTGCAGTTTCCAAGTCAGATGAAGGACTCTACAAGTGTAACAACTCTGAAGGAGAATCACCAGAGAGCTGGATGACTGTGACAGTTCCAACTCCCATTCCATCTCCAGCagtcccagtgttgtccatgtctctaccCAGGCTGCTGTGTAGTCTACTGGTGGGGTCTCCCTACCTGCTGGTGACCATCATACTGCTGGTGAAAGGCTGCAGGAGCAGTGCTCAAGACTTACAACCGACTGATTGCAGCCCTACCACAGAAATggaggagacaagaggaagagggagaagGTGATCGTGTTGAAGAAGAGTGAGGCTGAGATCACCTGATCACCATAACAACCATCAGAATGGAACTCATGGAATTCTAATATAGAACTGTGAGTCACAATGCTGTATGTTGTTACATTGTAGCTCCACCTGCTGGAACAATAGTGGCATTTGATCAAATGTGATCTATTAACTGATACATGTATTATTCTGATTGGAATGTGTTTTAATATCATGTGTGTTGTATTATTCATTCAGCAGCTGTCCTTTAACATCAGTCATATACTGGTCATatactctatagccttatggttGATACATTGTAAATGCCTTAACTTTTCAGGTCTATACAGATCAACTGATAGGTGTTGAGGTTCAGGCATTATTGTTACAGGTTCAGTATAATGTTATACCGTTACATGTTACAGAGATAGAAAACATACAGGAGAGGAGAATTCAATTATTACAATTATTTACTTTATTTTGTTTAAACATGACTAATGTAGGCTTTTGTTTTATAGTGCAAAATCATTATTTTTCAATGAATAATCCTGGTAAGATATTGCTTTTGTCTTTGTAGCATATAGAATTAAAAAAATGATTTTCCTCAA

Function

NR:

description
Fc receptor-like protein 5 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987040.1 True 1159 mRNA 0.41 5 2727465 2788437

Neighbor

gene id symbol gene type direction distance location
LOC110519362 NA coding downstream 46830 2612467 ~ 2680635 (-)
mog NA coding downstream 357988 2357311 ~ 2369477 (-)
LOC110535267 NA coding downstream 373152 2212274 ~ 2354313 (-)
LOC118966148 NA coding downstream 564856 2161247 ~ 2162609 (-)
LOC118965955 NA coding downstream 568784 2157982 ~ 2158681 (-)
LOC110531328 LOC106578170 coding upstream 24958 2813395 ~ 2824097 (-)
LOC110531335 LOC106593060 coding upstream 70322 2858759 ~ 2861355 (-)
LOC110531336 LOC106593060 coding upstream 82330 2870767 ~ 2875089 (-)
LOC110531340 LOC106578174 coding upstream 98135 2886572 ~ 2913710 (-)
LOC110531345 NA coding upstream 133991 2922428 ~ 2925281 (-)
G763748 NA non-coding downstream 23292 2550749 ~ 2704173 (-)
G763773 NA non-coding downstream 49453 2637437 ~ 2678012 (-)
G763751 NA non-coding downstream 136630 2548674 ~ 2590835 (-)
G763747 NA non-coding downstream 152968 2552840 ~ 2574497 (-)
G763743 NA non-coding downstream 184286 2542868 ~ 2543179 (-)
G763320 LOC106578169 non-coding upstream 12184 2800621 ~ 2803861 (-)
G763800 NA non-coding upstream 20802 2809239 ~ 2810641 (-)
G763815 NA non-coding upstream 40939 2829376 ~ 2829607 (-)
G763816 NA non-coding upstream 41715 2830152 ~ 2830510 (-)
G763817 NA non-coding upstream 47453 2835890 ~ 2836542 (-)
G763719 NA other downstream 240564 2473098 ~ 2486901 (-)
G763587 NA other downstream 749234 1962973 ~ 1978231 (-)
G762459 NA other downstream 1861033 861374 ~ 866432 (-)
G762118 NA other downstream 2290965 429600 ~ 436500 (-)
G762116 NA other downstream 2428946 293672 ~ 298519 (-)
G763961 NA other upstream 507865 3286243 ~ 3299103 (-)
LOC110498423 LOC105006500 other upstream 1063534 3851852 ~ 3901549 (-)
LOC118966151 LOC106587785 other upstream 1225397 4012152 ~ 4033537 (-)
G765059 NA other upstream 1502358 4270732 ~ 4319826 (-)
G765100 LOC106597704 other upstream 1657890 4446327 ~ 4536079 (-)

Expression


Co-expression Network