LOC110531341


Basic Information

Item Value
gene id LOC110531341
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 2986811 ~ 3004194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989228.1
atgtatccaccaatccaaagaaaggataggtTTAAGCTGGACAGCCCGCCGTACCGCGTTGTGGACAACAACTCCCATTCCATTactgGTAAAGTAGACCCCCAACACCCCAGGGTGTGTGGTCACAGTGCCAGGGTGTTGGATGTCAAGTGGAACCCCTTTGATGACCACTGCATCGCCTCCTGCTCTGAAGACTGCACCGTAAAGCTATGGGACATCCCAGCCAATGGTGTCTATCAGAACATGACCCTCCCTAGGAAGGTGCTTCAGGGTCACAGCCGCAGAGTCAACCTGATAGAATGGCACCCTACTGCTCGGGATCTACTGGTCAGCTCAGCCTACGACTACAagGTGATGGTCTgggatgtgtcagtgtgtgactCAGTGCTGAGGAACCCAGTATGTGTTATTTCTCTTCACACTGAGCTGGTTCTCTCCATGTCCTTCAACAATGACGGCAGCTCTCTAGCTACCACCAGCCTGGACAAGAAGATCAGAGTCATGGACCCACGTACTGGACGCCTCATACAGgtctccAGCAGTAAACTCCACAGGGCCAATAAGGTGGTGTTTATAGGAGACCAGAACATGCTGTTTTCTACTGGCAGCTCACCATGGAACCAAAGACAGATCACATTATGGGAtccgGATGATCTGTCAGAGCCGCTGTCGGAGGAGGAGGTGGATGGAGGTGCAGGAGTACTCTTCCCATTCTACGACCCTGATACACACATCCTCTACCTGGCTGGCAAGggtgATGGTAACATCCGGTATTATGAGATCAGTTCTGAGAAGCCCTACGTTCACTTCCTCACTGAGTATTACTCCCTACTGCCTCAGAAAGGATtggGGGTCATGCCTAAGCGCGGTCTGGACGTGAGTTCCTGTGAGGTGTTCCGGTTCTACCGCTTGGTGACCGTTAAGGACCTGGTCGAACCGCTCTCCATGATCGTCCCTCGCAGGTCCCCAAAGACCTTCCAGGATGACATCTTCCCCATGACAGCAGGCAATGAGGCGGCACTGACGGCTCAGCAGTGGCTCTCAGGGATCAATAGAGGCCCGGTGCTGATGTGTCTGAAACCTGGCAGTAGGATAGCCAACCCCTACCCTGAGACCCTACcaaggagggggctgagcagcTTCCAGAGTGGGGGACCAGGAGAGACAGGGTCCACGGAGCAGGCCTTCCTCCAGGAGCAGCTGGCCTACCAGGATGCCAAGTACCCCAGGGAAGTGGCTGATCTGTCGGGCTGGCAGCCAGACGAGACCCAGGCTCCGGGTTGGGCCTACACTCCCCACTGTTGTGAGCCCTCAGAGTGCCCTCCTCCCAGGACAGAGAGTGAGCTCCTTCAGGCATTCTACAGACAACAAGAGGAGATCAGGGGACTGAGAGACCAGCTCAACCAGAAAAAGGTTGTATATACTGAGTGTtctaaacattaagaacaccttcctaatatg

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: coronin-2A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989228.1 True 1461 mRNA 0.54 11 2986811 3004194

Neighbor

gene id symbol gene type direction distance location
LOC110531347 NA coding downstream 28259 2957307 ~ 2958552 (-)
LOC110531345 NA coding downstream 61530 2922428 ~ 2925281 (-)
LOC110531340 LOC106578174 coding downstream 73101 2886572 ~ 2913710 (-)
LOC110531336 LOC106593060 coding downstream 111722 2870767 ~ 2875089 (-)
LOC110531335 LOC106593060 coding downstream 125456 2858759 ~ 2861355 (-)
LOC110531321 tec coding upstream 9968 3014162 ~ 3057472 (-)
abcg2 abcg2 coding upstream 105836 3110030 ~ 3143404 (-)
LOC110532888 abcg2 coding upstream 162494 3166688 ~ 3202278 (-)
LOC110531332 LOC106578195 coding upstream 218770 3222964 ~ 3248776 (-)
si:ch211-149b19.2 LOC106578193 coding upstream 256183 3260377 ~ 3265629 (-)
G763864 NA non-coding downstream 1478 2985014 ~ 2985333 (-)
G763862 NA non-coding downstream 4632 2980048 ~ 2982179 (-)
G763859 NA non-coding downstream 18493 2967840 ~ 2968318 (-)
G763806 NA non-coding downstream 24130 2961754 ~ 2962681 (-)
G763870 NA non-coding upstream 10460 3014654 ~ 3015185 (-)
G763876 NA non-coding upstream 27165 3031359 ~ 3031880 (-)
G763880 NA non-coding upstream 34964 3039158 ~ 3040285 (-)
G763881 NA non-coding upstream 36828 3041022 ~ 3041632 (-)
G763892 NA non-coding upstream 56735 3060929 ~ 3061140 (-)
G763719 NA other downstream 499910 2473098 ~ 2486901 (-)
G763587 NA other downstream 1008580 1962973 ~ 1978231 (-)
G762459 NA other downstream 2120379 861374 ~ 866432 (-)
G762118 NA other downstream 2550311 429600 ~ 436500 (-)
G762116 NA other downstream 2688292 293672 ~ 298519 (-)
G763961 NA other upstream 292108 3286243 ~ 3299103 (-)
LOC110498423 LOC105006500 other upstream 847777 3851852 ~ 3901549 (-)
LOC118966151 LOC106587785 other upstream 1009640 4012152 ~ 4033537 (-)
G765059 NA other upstream 1286601 4270732 ~ 4319826 (-)
G765100 LOC106597704 other upstream 1442133 4446327 ~ 4536079 (-)

Expression


Co-expression Network