LOC110531321 (tec)


Basic Information

Item Value
gene id LOC110531321
gene name tec
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 3014162 ~ 3057472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987060.1
AGAGGTGAGTGTTTGTCCTCACCAAGACCAAGCTCACATACTATGAGTTCAGAGCAGAGAAGAAGTTTAAGAAGGGGTCCATCGACCTGCAGAAAGTCAGGTGTGTGGAGATCGTGAAGAATGACGGAGTCATACCCTGTCAGAACAAATATCCCTTCCAGgTGGTGTATGACACAAGCACTCTCTATGTATTTGCTCCCAGCTATGAGAGTAGGAGGATCTGGGTCCAAAACATTAAGGAAGAGATCAGGGACAACTCTGTGATCGTTGCTAAGTTCCATCCTCAGTTCTGGATGGAAGGCGTGTGGCTGTGCTGTCGTCAGGCAGAGAAACTGGCCCCGGGCTGTGAGGAGTACAACCTGTTTGGAGACCTTTCGAGGAAACTTCTTCCTCCCATACCTGGAGAGGAGGGCACAGGAAGGTCTCGtcggcctccccctccccctccccccccccctcccgtacACAGCcctgatgatggtagtggtgtcgAGGAGGTTGTGGTAGCTCTGTATGACTTCTTTGGTCCTGAACCACATGACCTGACTATGACCAAAGGAGCAGAATACGTCATACTGGAGAAATGTGACATCAACTGGTACAAGGCCCGCAACATATACGGGAAGGAGGGCTACATCCCCAGCAACTACGTGACAGATAAAAAATTGGGGAACCTGGAACAGTATGCCTGGTACAGTAAACATGTCAACCGGAACAAAGCTGAGGAACTACTGCGGACAGAGgacAAAGAGGGAGGGTTCATGGTAAGAGACTCCAGTAAGCCAGGCGCCTACACcgtctccctgtacaccaagtcagcaGGGGAGGGAGGTGCAGCTATCAGGCATTACCACATCAAGGAGACCTCCGGCTGCCCCAGACAGTTCTACCTGGCTGAGAAACACCTGTTCACCTTGATACCTGACCTCATCGAGTACCACAATCACAACGCTGCAggtcTGGTAGCCAGGTTGAGGTATCCAGTAGGGAAGGAGAGATCGGCTCCATCCACAGCAGGCTTCAGCTACGAGAAGTGGGAGATCAACCCTTGTGAGCTGACCTTCATGAAGGAGCTGGGATGTGGTCAGTTTGGGGTGGTGCGGCTGGGGAAATGGAGAGCGCAACACAAAGTAGCCATCAAGGCTATCAGAGAGGGAGCCATGTACGAAGAAGACTTCATAGAGGAAGCCAAGGTTATGATgcgTCTCACCCATCCTAAGCTGGTGCAGCTGTATGGAGTGTGTACCCACCAGAAACCCATCTACATTGTGACTGAGTTCATGGGACTGGGATGTCTGCTCAATTATGTCAGGCAGCGTCGGGACACCTTCAGCCTGGGGTCCTTACTGAGTATCTGTCAGGACGTCTCAGAGGGGATGGAACACCTGGAGGCACACGGCTTCATACACAGAGACCTGgcagcGAGGAACTGTCTGGTGAACGATGCTCTGGTGGTGAAGGTATCAGACTTTGGAATGGCCAGgtatgTACTAGATGACCAGTACACTAGTTCATCAGGCTCTAAGTTCCCAGTCAAGTGGTCTCCTCCTGAAGTCTTCAACTTCTGCAAGTACAGCAGCAAGTCGGACGTCTGGTCCTTCGgtgtGTTGATGTGGGAGGTGTTTACAGAGGGGAAGATGCCGTTTGAACACAACCCTAACCACgaggtagtgatgatggtgttaGAAGGACATCGCCTCTACAGACCCAAGAAGGCCACGCCCAACATCTATGACATCATGCTGCGCTGCTGGCACGAGagagcagaagagagaccATCGTTTTCTCAGATCTCCATCTTGATCTCCGATGCTCTAGAAGTGGATGGGTCCTCCGCCGCCTGAACCCACCAATCAAATCGCAACCACCAGTCGGATCTCCTCAGATCCAGTGTTGATGGAGGACTGCTTCCACACCGCTCTCTGTACTGATGGATCTCTCATGATGGACGATTACGGTGGAGTTTGTTAGACAGGAAGTTTGCGTCCAAATACCATATACTGTTTTACCACTTCTATCCTGTCTGACAGGAAACTGGACAGTCTTCTCAAAACGTATAtgttttatccccccccccccccccc
>XM_036987059.1
GGTCCCTCGTCTTCTCCGCGTCTCTTCAattgaaaatgaatgggaagtGGTGTTTCACCGCGCGGCACCGTGTGAAATAGTGTACACTAGGGCAGTCTGTGTCGCTTCCTGGTTCTGCTGGTCACATAGTGACAGTCAGTGGAGTCAAAAGAATATCAGTTCACTCTCGGAAGAAAAGTGTTCGATGGCAGAGTGGAGGGAGTGGGCGGGTCCAAGATGAGTGCTGACACGCTATTGGAGGAGACCCTGATCAAGCGGTCTCAGCAGAAGAGGTTGACGTCACCGCTGAACTACAAGGAGAGAGTGTTCGTCCTCACCAAGACCAAGCTCACATACTATGAGTTCAGAGCAGAGAAGAAGTTTAAGAAGGGGTCCATCGACCTGCAGAAAGTCAGGTGTGTGGAGATCGTGAAGAATGACGGAGTCATACCCTGTCAGAACAAATATCCCTTCCAGgTGGTGTATGACACAAGCACTCTCTATGTATTTGCTCCCAGCTATGAGAGTAGGAGGATCTGGGTCCAAAACATTAAGGAAGAGATCAGGGACAACTCTGTGATCGTTGCTAAGTTCCATCCTCAGTTCTGGATGGAAGGCGTGTGGCTGTGCTGTCGTCAGGCAGAGAAACTGGCCCCGGGCTGTGAGGAGTACAACCTGTTTGGAGACCTTTCGAGGAAACTTCTTCCTCCCATACCTGGAGAGGAGGGCACAGGAAGGTCTCGtcggcctccccctccccctccccccccccctcccgtacACAGCcctgatgatggtagtggtgtcgAGGAGGTTGTGGTAGCTCTGTATGACTTCTTTGGTCCTGAACCACATGACCTGACTATGACCAAAGGAGCAGAATACGTCATACTGGAGAAATGTGACATCAACTGGTACAAGGCCCGCAACATATACGGGAAGGAGGGCTACATCCCCAGCAACTACGTGACAGATAAAAAATTGGGGAACCTGGAACAGTATGCCTGGTACAGTAAACATGTCAACCGGAACAAAGCTGAGGAACTACTGCGGACAGAGgacAAAGAGGGAGGGTTCATGGTAAGAGACTCCAGTAAGCCAGGCGCCTACACcgtctccctgtacaccaagtcagcaGGGGAGGGAGGTGCAGCTATCAGGCATTACCACATCAAGGAGACCTCCGGCTGCCCCAGACAGTTCTACCTGGCTGAGAAACACCTGTTCACCTTGATACCTGACCTCATCGAGTACCACAATCACAACGCTGCAggtcTGGTAGCCAGGTTGAGGTATCCAGTAGGGAAGGAGAGATCGGCTCCATCCACAGCAGGCTTCAGCTACGAGAAGTGGGAGATCAACCCTTGTGAGCTGACCTTCATGAAGGAGCTGGGATGTGGTCAGTTTGGGGTGGTGCGGCTGGGGAAATGGAGAGCGCAACACAAAGTAGCCATCAAGGCTATCAGAGAGGGAGCCATGTACGAAGAAGACTTCATAGAGGAAGCCAAGGTTATGATgcgTCTCACCCATCCTAAGCTGGTGCAGCTGTATGGAGTGTGTACCCACCAGAAACCCATCTACATTGTGACTGAGTTCATGGGACTGGGATGTCTGCTCAATTATGTCAGGCAGCGTCGGGACACCTTCAGCCTGGGGTCCTTACTGAGTATCTGTCAGGACGTCTCAGAGGGGATGGAACACCTGGAGGCACACGGCTTCATACACAGAGACCTGgcagcGAGGAACTGTCTGGTGAACGATGCTCTGGTGGTGAAGGTATCAGACTTTGGAATGGCCAGgtatgTACTAGATGACCAGTACACTAGTTCATCAGGCTCTAAGTTCCCAGTCAAGTGGTCTCCTCCTGAAGTCTTCAACTTCTGCAAGTACAGCAGCAAGTCGGACGTCTGGTCCTTCGgtgtGTTGATGTGGGAGGTGTTTACAGAGGGGAAGATGCCGTTTGAACACAACCCTAACCACgaggtagtgatgatggtgttaGAAGGACATCGCCTCTACAGACCCAAGAAGGCCACGCCCAACATCTATGACATCATGCTGCGCTGCTGGCACGAGagagcagaagagagaccATCGTTTTCTCAGATCTCCATCTTGATCTCCGATGCTCTAGAAGTGGATGGGTCCTCCGCCGCCTGAACCCACCAATCAAATCGCAACCACCAGTCGGATCTCCTCAGATCCAGTGTTGATGGAGGACTGCTTCCACACCGCTCTCTGTACTGATGGATCTCTCATGATGGACGATTACGGTGGAGTTTGTTAGACAGGAAGTTTGCGTCCAAATACCATATACTGTTTTACCACTTCTATCCTGTCTGACAGGAAACTGGACAGTCTTCTCAAAACGTATAtgttttatccccccccccccccccc
>XM_036987058.1
gtttacattttttttcGCCTCCTCCGCGCCGTCCAACGGTCCCTCGTCTTCTCCGCGTCTCTTCAattgaaaatgaatgggaagtGGTGTTTCACCGCGCGGCACCGTGTGAAATAGTGTACACTAGGGCAGTCTGTGTCGCTTCCTGGTTCTGCTGGTCACATAGTGACAGTCAGTGGAGTCAAAAGAATATCAGTTCACTCTCGGAAGAAAAGTCAGTGTTCGATGGCAGAGTGGAGGGAGTGGGCGGGTCCAAGATGAGTGCTGACACGCTATTGGAGGAGACCCTGATCAAGCGGTCTCAGCAGAAGAGGTTGACGTCACCGCTGAACTACAAGGAGAGAGTGTTCGTCCTCACCAAGACCAAGCTCACATACTATGAGTTCAGAGCAGAGAAGAAGTTTAAGAAGGGGTCCATCGACCTGCAGAAAGTCAGGTGTGTGGAGATCGTGAAGAATGACGGAGTCATACCCTGTCAGAACAAATATCCCTTCCAGgTGGTGTATGACACAAGCACTCTCTATGTATTTGCTCCCAGCTATGAGAGTAGGAGGATCTGGGTCCAAAACATTAAGGAAGAGATCAGGGACAACTCTGTGATCGTTGCTAAGTTCCATCCTCAGTTCTGGATGGAAGGCGTGTGGCTGTGCTGTCGTCAGGCAGAGAAACTGGCCCCGGGCTGTGAGGAGTACAACCTGTTTGGAGACCTTTCGAGGAAACTTCTTCCTCCCATACCTGGAGAGGAGGGCACAGGAAGGTCTCGtcggcctccccctccccctccccccccccctcccgtacACAGCcctgatgatggtagtggtgtcgAGGAGGTTGTGGTAGCTCTGTATGACTTCTTTGGTCCTGAACCACATGACCTGACTATGACCAAAGGAGCAGAATACGTCATACTGGAGAAATGTGACATCAACTGGTACAAGGCCCGCAACATATACGGGAAGGAGGGCTACATCCCCAGCAACTACGTGACAGATAAAAAATTGGGGAACCTGGAACAGTATGCCTGGTACAGTAAACATGTCAACCGGAACAAAGCTGAGGAACTACTGCGGACAGAGgacAAAGAGGGAGGGTTCATGGTAAGAGACTCCAGTAAGCCAGGCGCCTACACcgtctccctgtacaccaagtcagcaGGGGAGGGAGGTGCAGCTATCAGGCATTACCACATCAAGGAGACCTCCGGCTGCCCCAGACAGTTCTACCTGGCTGAGAAACACCTGTTCACCTTGATACCTGACCTCATCGAGTACCACAATCACAACGCTGCAggtcTGGTAGCCAGGTTGAGGTATCCAGTAGGGAAGGAGAGATCGGCTCCATCCACAGCAGGCTTCAGCTACGAGAAGTGGGAGATCAACCCTTGTGAGCTGACCTTCATGAAGGAGCTGGGATGTGGTCAGTTTGGGGTGGTGCGGCTGGGGAAATGGAGAGCGCAACACAAAGTAGCCATCAAGGCTATCAGAGAGGGAGCCATGTACGAAGAAGACTTCATAGAGGAAGCCAAGGTTATGATgcgTCTCACCCATCCTAAGCTGGTGCAGCTGTATGGAGTGTGTACCCACCAGAAACCCATCTACATTGTGACTGAGTTCATGGGACTGGGATGTCTGCTCAATTATGTCAGGCAGCGTCGGGACACCTTCAGCCTGGGGTCCTTACTGAGTATCTGTCAGGACGTCTCAGAGGGGATGGAACACCTGGAGGCACACGGCTTCATACACAGAGACCTGgcagcGAGGAACTGTCTGGTGAACGATGCTCTGGTGGTGAAGGTATCAGACTTTGGAATGGCCAGgtatgTACTAGATGACCAGTACACTAGTTCATCAGGCTCTAAGTTCCCAGTCAAGTGGTCTCCTCCTGAAGTCTTCAACTTCTGCAAGTACAGCAGCAAGTCGGACGTCTGGTCCTTCGgtgtGTTGATGTGGGAGGTGTTTACAGAGGGGAAGATGCCGTTTGAACACAACCCTAACCACgaggtagtgatgatggtgttaGAAGGACATCGCCTCTACAGACCCAAGAAGGCCACGCCCAACATCTATGACATCATGCTGCGCTGCTGGCACGAGagagcagaagagagaccATCGTTTTCTCAGATCTCCATCTTGATCTCCGATGCTCTAGAAGTGGATGGGTCCTCCGCCGCCTGAACCCACCAATCAAATCGCAACCACCAGTCGGATCTCCTCAGATCCAGTGTTGATGGAGGACTGCTTCCACACCGCTCTCTGTACTGATGGATCTCTCATGATGGACGATTACGGTGGAGTTTGTTAGACAGGAAGTTTGCGTCCAAATACCATATACTGTTTTACCACTTCTATCCTGTCTGACAGGAAACTGGACAGTCTTCTCAAAACGTATAtgttttatccccccccccccccccc

Function

symbol description
tec Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to be involved in adaptive immune response; antigen receptor-mediated signaling pathway; and peptidyl-tyrosine autophosphorylation. Predicted to act upstream of or within immune system process; intracellular signal transduction; and protein phosphorylation. Orthologous to human TEC (tec protein tyrosine kinase).

NR:

description
tyrosine-protein kinase Tec

GO: NA

KEGG:

id description
K07364 TEC; tyrosine-protein kinase Tec

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987060.1 False 2084 mRNA 0.52 18 3014162 3048828
XM_036987059.1 False 2379 mRNA 0.52 19 3014162 3057435
XM_036987058.1 True 2420 mRNA 0.52 19 3014162 3057472

Neighbor

gene id symbol gene type direction distance location
LOC110531341 NA coding downstream 9968 2986811 ~ 3004194 (-)
LOC110531347 NA coding downstream 55610 2957307 ~ 2958552 (-)
LOC110531345 NA coding downstream 88881 2922428 ~ 2925281 (-)
LOC110531340 LOC106578174 coding downstream 100452 2886572 ~ 2913710 (-)
LOC110531336 LOC106593060 coding downstream 139073 2870767 ~ 2875089 (-)
abcg2 abcg2 coding upstream 52558 3110030 ~ 3143404 (-)
LOC110532888 abcg2 coding upstream 109216 3166688 ~ 3202278 (-)
LOC110531332 LOC106578195 coding upstream 165492 3222964 ~ 3248776 (-)
si:ch211-149b19.2 LOC106578193 coding upstream 202905 3260377 ~ 3265629 (-)
rnf150b LOC106527319 coding upstream 244645 3302114 ~ 3337749 (-)
G763853 NA non-coding downstream 12526 3000425 ~ 3001636 (-)
G763864 NA non-coding downstream 28829 2985014 ~ 2985333 (-)
G763862 NA non-coding downstream 31983 2980048 ~ 2982179 (-)
G763859 NA non-coding downstream 45844 2967840 ~ 2968318 (-)
G763806 NA non-coding downstream 51481 2961754 ~ 2962681 (-)
G763892 NA non-coding upstream 3457 3060929 ~ 3061140 (-)
G763901 NA non-coding upstream 13703 3071175 ~ 3071479 (-)
G763902 LOC107662719 non-coding upstream 15256 3072728 ~ 3073146 (-)
G763903 NA non-coding upstream 16441 3073913 ~ 3074183 (-)
G763904 NA non-coding upstream 16991 3074463 ~ 3074680 (-)
G763719 NA other downstream 527261 2473098 ~ 2486901 (-)
G763587 NA other downstream 1035931 1962973 ~ 1978231 (-)
G762459 NA other downstream 2147730 861374 ~ 866432 (-)
G762118 NA other downstream 2577662 429600 ~ 436500 (-)
G762116 NA other downstream 2715643 293672 ~ 298519 (-)
G763961 NA other upstream 238830 3286243 ~ 3299103 (-)
LOC110498423 LOC105006500 other upstream 794499 3851852 ~ 3901549 (-)
LOC118966151 LOC106587785 other upstream 956362 4012152 ~ 4033537 (-)
G765059 NA other upstream 1233323 4270732 ~ 4319826 (-)
G765100 LOC106597704 other upstream 1388855 4446327 ~ 4536079 (-)

Expression


Co-expression Network