XLOC_026579 (tac4)


Basic Information

Item Value
gene id XLOC_026579
gene name tac4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34623560 ~ 34624745 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051779
GAGGAGCGATGGCTGAAGTCTCTATAAAAGCATCTCGAGCAAACAGCAGTTCTGTGTTTTCTTTAAACTGTAATATCAAATAAAGACAAATATAAAGCATATAGAAATAATGGACATATTTAAACTTTCTGCTTTAGCGTTCATCCTTTACTTGCAGTTGCACAATGCTGGAGCCAGTCCCAGTGAAGAGGGGGATATCTGGACTGTGGAGAACTTGGAGGAGAAGCCACAGGTGACAGATGTATTCCTTCGCATTGCTGATCTGATGAAACGATCCAAATCTCAGCATTTTCATGGATTAATGGGCAGCAGCGCAGGCAATACTCAACCTTTGCGACTTGGCAGGAGAAGAAACAAGGGTGAAATCTTTGTTGGACTTATGGGAAGAAGATCTTCGAGTGATTTGCGAGAGCAACTGGAGAGACGTCAACTATAACTTCAAGCAAGTGCTCATGCAAGCCTTCTGTTTAGTTAGACACAAATTAAAATGATTGCTCACtcaa

Function

symbol description
tac4 Predicted to enable substance P receptor binding activity. Predicted to be involved in inflammatory response; positive regulation of cytosolic calcium ion concentration; and tachykinin receptor signaling pathway. Predicted to be active in extracellular space. Orthologous to human TAC4 (tachykinin precursor 4).

GO:

id name namespace
GO:0007204 positive regulation of cytosolic calcium ion concentration biological_process
GO:0007217 tachykinin receptor signaling pathway biological_process
GO:0006954 inflammatory response biological_process
GO:0005615 extracellular space cellular_component
GO:0031835 substance P receptor binding molecular_function

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

ZFIN:

id description
ZDB-GENE-120215-159 Predicted to enable substance P receptor binding activity. Predicted to be involved in inflammatory response; positive regulation of cytosolic calcium ion concentration; and tachykinin receptor signaling pathway. Predicted to be active in extracellular space. Orthologous to human TAC4 (tachykinin precursor 4).

Ensembl:

ensembl_id ENSDARG00000096234

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051779 True 503 mRNA 0.42 5 34623560 34624745

Neighbor

gene id symbol gene type direction distance location
XLOC_026578 zgc:163143 coding downstream 10459 34601852 ~ 34613101 (-)
XLOC_026577 nmrk1 coding downstream 23898 34597741 ~ 34599662 (-)
XLOC_026576 si:ch211-165d12.4 coding downstream 29921 34587988 ~ 34593639 (-)
XLOC_026575 sept9a coding downstream 37157 34452336 ~ 34586403 (-)
XLOC_026574 tnrc6c1 coding downstream 285591 34258755 ~ 34337969 (-)
XLOC_026580 NA coding upstream 16303 34641048 ~ 34641973 (-)
XLOC_026581 znfl1 coding upstream 27399 34652144 ~ 34656745 (-)
XLOC_026582 thraa coding upstream 63277 34688022 ~ 34753605 (-)
XLOC_026583 nsfa coding upstream 142244 34766989 ~ 34801041 (-)
XLOC_026584 psmd11a coding upstream 176401 34801146 ~ 34816979 (-)
XLOC_026572 NA non-coding downstream 482379 34139637 ~ 34141181 (-)
XLOC_026558 BX649502.11 non-coding downstream 537077 34086041 ~ 34086483 (-)
XLOC_026547 BX649502.5 non-coding downstream 558624 34063955 ~ 34064936 (-)
XLOC_026544 BX649502.10 non-coding downstream 564843 34058679 ~ 34058717 (-)
XLOC_026539 BX649502.4 non-coding downstream 574907 34048205 ~ 34048653 (-)
XLOC_026585 NA non-coding upstream 322657 34947402 ~ 34948061 (-)
XLOC_026588 NA non-coding upstream 940383 35565128 ~ 35574451 (-)
XLOC_026600 NA non-coding upstream 1695494 36320239 ~ 36323625 (-)
XLOC_026606 NA non-coding upstream 1958355 36583100 ~ 36587136 (-)

Expression


Co-expression Network