XLOC_026586 (ndufab1b)


Basic Information

Item Value
gene id XLOC_026586
gene name ndufab1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 35535121 ~ 35541381 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051796
TCTGGGATAGAAAGTCACAGACATGGCGTCCCGTGCGCTTGCACAGTGTGTGCGCTCGCTGGCCCGCGCATCTGCAAGGTTAAATGAAGGCAGAACCGCCTGCGTGCTTCTCGCCGCAGCCCAGCGGCCGCTCTCCTCATGGACCTGCAACCAGAGGACCAGCAGGACTGAACTACTGCGGATTCCCAGCCCGTCTGTTCATCTGTGTCGGCATTACAGTGATGCTCCACCCCTCACATTAGATGACATCCAGGAGCGAGTTCTGTATGTCCTTAAACTCTATGACAAGATCAATCCAGATGTGCTTAAATCGACGTCTCACTTCATGAAAGATCTGGGGCTGGACAGCTTGGACCAGGTGGAGATTATAATGGCCATGGAAGATGAGTTTGGGTTCGAGATCCCAGATGGGGATGGAGAGAAGCTTATGACTCCTGAGGAGATTGTAACATACATTGCAGATAAAAAAGATGTGTATGAATAGAGGCAAGTCACATGGTATGGAGGATTGACTCTGTATTAAACAATATGGCTGCAGCATTGAGTTCCAGTTGTACTATCTCCAGTCTCTTGTTTATGGAGTCAACTGCCTTGTCATGTGTACTGTTGTATTTAATGAAAATGTCACTATAAACTTTTTGGGAACTTGAGCTGAAAATAAAGCCAAGACTAAATTGTAATGCTTTGTTTTGTCATGATCTACGACGTGAAGCCTCACTGCTCCCTCTGGTGGTTGGAAAGAAACACTGCTGTTTGAGTATAATAGGTTTCCAATTCTGTTTCTGGAGGGCCAATAGTTCTAAGTTCTTCAACACGCTTGCTTGGAAGTCTCTGATCAGCTGGTTGAGGTGTTTTATTTGGACAGTAAATTTAATGTTCTCTGGCTGCCATGATCAGTCTctcacaatgtttttttcttttctgaaagtcttgataatgTCATCTTATAGTTTTTCTCTTATTTGTAGGACTCCCTATTTactgtgctctaagtttaccTTGAGAAACctagaaatgtgaaaagggtccattagacaaacttggattaaaaaaaaaatgttaaagctCGTATCCTAACAATCCACTTCTAATCAAATGCTGTGTTTTGAACGAATATAAATGAAACTGACTAAAGACCCCTAAATGGGAAAACAACAGGACATTGTCATTAACCGAGGCCATAAAAATGGCATATTCCTGCTTTCTTCTCTTTAAAGGAACTAAAACCAATTTTAAAAATAACCGAGCTCATTCACTAAAGAATAAAATCTACATTTCCatgaatttattaattgtattttattccaTAAACTACTGATGGCACAAAAACGTGTGATgttttcagacatttaaatattttaacctaATACCAAACACTATCTTTTgaagagttaaaaaaataatatttttgtaacagATTTTTAGTCAATCATTCTGAACAATGGTCAATTTTGTGGGAAAAAAAGCATTTAGTTTAAAATTTGGAAGATGTAATGAGACATTTattgaacagaaataaaataactatttactCAAA
>TCONS_00051797
GGGATAGAAAGTCACAGACATGGCGTCCCGTGCGCTTGCACAGTGTGTGCGCTCGCTGGCCCGCGCATCTGCAAGGTTAAATGAAGGCAGAACCGCCTGCGTGCTTCTCGCCGCAGCCCAGCGGCCGCTCTCCTCATGGACCTGCAACCAGAGGACCAGCAGGACTGAACTACTGCGGATTCCCAGCCCGTCTGTTCATCTGTGTCGGCATTACAGTGATGCTCCACCCCTCACATTAGATGACATCCAGGAGCGAGTTCTGTATGTCCTTAAACTCTATGACAAGATCAATCCAGATGTGCTTAAATCGACGTCTCACTTCATGAAAGATCTGGGGCTGGACAGCTTGGACCAGGTGGAGATTATAATGGCCATGGAAGATGAGTTTGGGTTCGAGATCCCAGATGGGGATGGAGAGAAGCTTATGACTCCTGAGGAGATTGTAACATACATTGCAGATAAAAAAGATGTGTATGAATAGAGGTATGGAGGATTGACTCTGTATTAAACAATATGGCTGCAGCATTGAGTTCCAGTTGTACTATCTCCAGTCTCTTGTTTATGGAGTCAACTGCCTTGTCATGTGTACTGTTGTATTTAATGAAAATGTCACTATAAACTTTTTGGGAACTTGAGCTGAAAATAAAGCCAAGACTAAATTGT

Function

symbol description
ndufab1b Predicted to enable acyl binding activity and acyl carrier activity. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be part of mitochondrial respiratory chain complex I. Predicted to be active in mitochondrion. Orthologous to human NDUFAB1 (NADH:ubiquinone oxidoreductase subunit AB1).

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0006631 fatty acid metabolic process biological_process
GO:0006633 fatty acid biosynthetic process biological_process
GO:0005747 mitochondrial respiratory chain complex I cellular_component
GO:0005739 mitochondrion cellular_component
GO:0000035 acyl binding molecular_function
GO:0000036 acyl carrier activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-4437 Predicted to enable acyl binding activity and acyl carrier activity. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be part of mitochondrial respiratory chain complex I. Predicted to be active in mitochondrion. Orthologous to human NDUFAB1 (NADH:ubiquinone oxidoreductase subunit AB1).

Ensembl:

ensembl_id ENSDARG00000014915

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051796 False 1537 mRNA 0.39 5 35535121 35541381
TCONS_00051797 True 663 mRNA 0.47 5 35535980 35541378

Neighbor

gene id symbol gene type direction distance location
XLOC_026585 NA coding downstream 587060 34947402 ~ 34948061 (-)
XLOC_026584 psmd11a coding downstream 718142 34801146 ~ 34816979 (-)
XLOC_026583 nsfa coding downstream 734080 34766989 ~ 34801041 (-)
XLOC_026582 thraa coding downstream 781516 34688022 ~ 34753605 (-)
XLOC_026581 znfl1 coding downstream 878376 34652144 ~ 34656745 (-)
XLOC_026587 dctn5 coding upstream 9489 35550870 ~ 35554809 (-)
XLOC_026588 NA coding upstream 23747 35565128 ~ 35574451 (-)
XLOC_026589 gng13b coding upstream 47831 35589212 ~ 35602233 (-)
XLOC_026590 caskin1 coding upstream 91392 35632773 ~ 35801146 (-)
XLOC_026591 suz12a coding upstream 308011 35849392 ~ 35865040 (-)
XLOC_026580 NA non-coding downstream 893148 34641048 ~ 34641973 (-)
XLOC_026572 NA non-coding downstream 1393940 34139637 ~ 34141181 (-)
XLOC_026558 BX649502.11 non-coding downstream 1448638 34086041 ~ 34086483 (-)
XLOC_026547 BX649502.5 non-coding downstream 1470185 34063955 ~ 34064936 (-)
XLOC_026600 NA non-coding upstream 778858 36320239 ~ 36323625 (-)
XLOC_026606 NA non-coding upstream 1041719 36583100 ~ 36587136 (-)
XLOC_026612 FO744883.1 non-coding upstream 1214652 36756033 ~ 36756149 (-)
XLOC_026617 NA non-coding upstream 1412244 36953625 ~ 36954088 (-)

Expression


Co-expression Network