gpha2 (LOC106578061)


Basic Information

Item Value
gene id gpha2
gene name LOC106578061
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6481631 ~ 6490957 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987194.1
ctctctctctggttctcttatctctctttctcatccctctctgtgttagtgtgtaggtggggaggttTAGTTAACATCATACATTCTGTTTCCGATGACATCAACAAATGTGCAATGTCTGTCGGGGGAAAGGGTCTGTCATTTTAATTGTGTTTTTGTATGAGTCTTTAAGTGTGTTTTGTGTTGGTGCTGGAGTCACTGAATAGAGTCTACAGTCATCATGTCAATGAGTTGAGCTTTAACATGTGGAGAGATGAACAACAGACCCAGGTGTCTCCTCACAATATCTCAGACTCACAGTAGGCGTCTCCTCACAATATCTCAGACCCACAGTATGTGTCTCCTCAATATCTCAGACCCACAGTAGGCGTCTCCTCAATATCTCACACCCACAGTAGGTGTCTCCTCAATATCTCACACCCACAGTAGGTGTCTCAATATCTCACTCACAGTAGGTGTCTCAATATCTCAGACCCACAGTAGGTGTCTCAATATCTCAGACCCACAGTAGGTGTCTCAATATCTCAGACCCACAGTAGGTGTCTCCTCAATATCTCAGACCCACAGTAGGCGTCTCCTCAATATCTCACACCCACAGTAGGTGTCTCCTCAATATCTCATACCCACAGTAGGTGTCTCCTCAATATCTCACACCCACAGTAAGTGTCTCCTCAATATCTCACACCCACAGTAGGTGTCTCAATATCTCAGACCAACAGTAGGTGTCTCAATATCTCAGACCCACAGTAGGTGTCTCAATATCTCAGACCCACAGTAAGTTTCTCCTCAATATCTCAGACCCACAGTAGGTGTCTCAACATCTCAGACCCACAGTAAGTTTCTCCTCAATATCTCACACCCACAGTAGGTGTCTCAATATCTCACACCCACAGTAAGTTTCTCCCCACAACATCTCAGCCTACCAGTCTTCTGCACACTCCCACTTGACCCAAACCCACAGTATCTCCTTACCCAACCCTGCCCATGGAAAACCCAGGCTTGACTCTGGACAGAtccttgactgtgtgtgtgtgtgtgtgagggggggggggtgtattggaCAGAGCAAGGAGCAAGGACAGAGCAAGGAGCAGCCCCTAGTGTCATTATGGCAATGgcccagtgggcctgtctaaATTGGCTGGAATTTACATCAGATGATCATTATTTGGCTTGGGGGCCTTGAGGAAAGAAAATGTGGTAGCTAGAAATGCCTGGGCCGAATTCTGATCCCAGTTCGCCcctgaaaggtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtacagtTCTGTAATGTGTTTTCTTACTATTGTGGCCGGTGATGTAAAACTTCTCTACTTTTCCCCTCCATGTAAGCTGTCTCCCAACCCTCCTCTGTACTGCCCTTTACAATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGAAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCATGGGGAGAAGGACTGCCCTTTACCAGGGCACGCGAGAGAGACGTGTTGGATTTGAGGTTTTCTGTAGgtgaagtgagtgagtgagagagagagaggtgcaaaACTGAAAGGTAGACTTACAGTGAACAGGAAATGAggggtccacacacacagagagaccgagagagagaccgagagagagagacagagatatagacacagagagagagagagagagagagaatcagagatatagacagagagagacagagagagagagagacacacacagagagaaacagagagagagagagagaaacagagagagagagagggagaggggctagCAGTGACTGACTGTGGGTGTGACTAAAGGCGGGACTCCGCCTCTTCTCCTGTTTACCTGAGGAGCTACAAATAGCAGTGTAAGAGGTAGGAAACACACACCTGTCACTGCTGCTGCCGTCGACTCACCCGGACTGAAGAAACCACACACCACACCTTTACAGACCACTGTCCTCTGTCGCCATGTGTCAGTGGTTGACCTCTAGCCTCTGTGTTGTGATGCTGCTGCTGTGTCCAGTCAGTTTCAGCTACGAGGGGCTCAGCCCAGGACCTGGCTGTCATCTATACCGGTTCAACGTGACCATCCGTAGTGACCAGCGTGGGACATGTAAAGGAACTCATGTTGTGAATGCCTGTGTTGGCTACTGTGAGTCCAGTGCCTTCCCATCTCGCTACTCTGTTCTGGTGGCATCGAACTTCACTCACAACATTACCTCGGCATCACAATGCTGCACCATCAGCAAGGACGCAAAGatCAAAGTTCGTCTTGACTGTCCTCGTGGTCGTCACCATGATGATATCGAGATCCTGACGGCTCAGGCCTGTCGTTGCGACATGTGTCGCAAGTCACGCTACTGACATGCCACCGTCTCCGCGGGAACACACGCTACACGCAACAAATTGTAACATGAGGACTTGGATGAAGAGAAGACAAGGAAATGTGTGTATAcaaggatagtgtgtgtgtgtgcgtgtatgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgaattgaATGGTCGGAAAAAAGGAAAAAAGACTTGAGGAAAACACTTTTCATACGGTCGCTTTATTTAAGATTTGTTTGTTTAAACATTGGTTTATTTAGGAACAGGAGGCAGTTTGTGACACTTTGACtcaacaccctattccctatgtagtgcactacttttgaccagggcccatacaaactagtgcactacttttgaccaggacccatacaaactagtgcactacttttgaccagggcccatacaaactagtgcactacttttgaccagggcccatacaaactagtgcactacttttgaccacggccccatacaaactagtgcactacaaaggtagattgggtgccaattgggacgtaGACACTGACATCCAGTTAAACCACTATAGATAATAAAATCATTAAAACCCACTACATAGATCTGTTATACAGCCACaacacagaactagaatgagcaGAATGgacatccccattcaagtcagtGAGTAAACTGGGCGCCATTTTGAACGCGGACCAGTGTCAGAGGTTCCAATTCCATTCATTTGATTTCTACGGCCACTAAACTAGAGGGACTAAAGGATGTACATTAATAAATAAACTGTATTTATGTCTATGACCCACTTACATATTGTAAATAAGTGACCTGAAAGAATGTTGGAAGGGTTGACCAAATAAAAATGGGAAAAATAATCACTCAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106578061

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987194.1 True 3854 mRNA 0.49 4 6481631 6490957

Neighbor

gene id symbol gene type direction distance location
arl2 arl2 coding downstream 72063 6407522 ~ 6409568 (-)
LOC110531397 NA coding downstream 116059 6358150 ~ 6365572 (-)
LOC118966206 NA coding downstream 118579 6362989 ~ 6363052 (-)
LOC118966209 NA coding downstream 119063 6362505 ~ 6362568 (-)
LOC118966212 NA coding downstream 119383 6362177 ~ 6362248 (-)
LOC110532903 LOC106578061 coding upstream 9805 6500762 ~ 6525335 (-)
badb LOC106578087 coding upstream 42206 6533163 ~ 6535751 (-)
LOC110510780 plcb3 coding upstream 193697 6636026 ~ 6834904 (-)
LOC110531366 LOC106578102 coding upstream 360240 6851197 ~ 6882912 (-)
LOC110531364 LOC106578119 coding upstream 395038 6885995 ~ 6907134 (-)
G766755 NA non-coding downstream 13156 6467684 ~ 6468475 (-)
G766749 NA non-coding downstream 17529 6457203 ~ 6464631 (-)
G766735 NA non-coding downstream 48980 6432298 ~ 6432651 (-)
G766725 NA non-coding downstream 70340 6411051 ~ 6411291 (-)
G766707 NA non-coding downstream 74358 6406656 ~ 6407273 (-)
G766768 NA non-coding upstream 13605 6504562 ~ 6504893 (-)
G766783 NA non-coding upstream 36920 6527877 ~ 6528679 (-)
G766701 NA non-coding upstream 39083 6530040 ~ 6533107 (-)
G766858 NA non-coding upstream 139482 6630439 ~ 6631134 (-)
G766665 NA other downstream 116103 6340621 ~ 6365895 (-)
G766640 NA other downstream 225003 6251597 ~ 6262155 (-)
G766599 LOC106578100 other downstream 272422 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1183194 5297476 ~ 5298437 (-)
G766850 LOC106578109 other upstream 121122 6612079 ~ 6613412 (-)
LOC110531380 LOC106578126 other upstream 474497 6963142 ~ 6969857 (-)
G767056 ovol1 other upstream 754687 7245644 ~ 7251075 (-)
LOC110510419 LOC106560462 other upstream 1621631 8112588 ~ 8155916 (-)

Expression


Co-expression Network