badb (LOC106578087)


Basic Information

Item Value
gene id badb
gene name LOC106578087
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6533163 ~ 6535751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987193.1
CCGCGCAGGGCCCGGTCATTGGTGGAGCGCAGGACAGCGAGCGGCGCGGTGGATAGACTGCCGCTACGCTATTGGGGGAGGGAAGACAAACTGGATCCGAACAACAAAAAAGACCAGATAACAACAATATCAAGTTGGAAATAGAAAGCGCGATACGCGGCTGCTCGAACATATTTACCCGTTAAAAACACTTTGGATGTCAGCATGGCTCAGATGTTTACTATATCAGACAGCGAGTCAGAGCCCTCAGAGGAGATAGGAGAAACCAAAAAGGACCAATCGTCTGCCGGAAAGGGGATAACTGGCGGTCCAATAGGCCACGCCCTCACTGTGCCTGAGATGAGACTGGCAGgAGAGGGTCGGTTGAGGATGAACTCAGAGTCCCAGGCCCAGGAGCTCCAGGGTAGGGGGCCAGGGGTGGAAGGCGTGCCCACAGACGGAGCATCTTTCCGGGGTCGCTCCCAGTCGGCCCCCCCTGCTCTCTGGGCGGCCAAGAGATACGGGCGGCAGCTCCGACGCATGAGTGACGAGTTCGATACGTGGCTGGATAAAGGGGAGATGAGGCGGGTGAAGAGTGCAGGAGCAGCCAAACAGATGACCAAGTCCCCCAGCTGGTGGGCCTACCTGTTCAGTCataaggagacagagacagaacatacCCCTATCATCCCACCACGATCATCTgagtagagaggaggatggggggggggggggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K02158 BAD; Bcl-2-antagonist of cell death

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987193.1 True 717 mRNA 0.58 4 6533163 6535751

Neighbor

gene id symbol gene type direction distance location
LOC110532903 LOC106578061 coding downstream 7828 6500762 ~ 6525335 (-)
gpha2 LOC106578061 coding downstream 42206 6481631 ~ 6490957 (-)
arl2 arl2 coding downstream 123595 6407522 ~ 6409568 (-)
LOC118966206 NA coding downstream 170111 6362989 ~ 6363052 (-)
LOC118966209 NA coding downstream 170595 6362505 ~ 6362568 (-)
LOC110510780 plcb3 coding upstream 148903 6636026 ~ 6834904 (-)
LOC110531366 LOC106578102 coding upstream 315446 6851197 ~ 6882912 (-)
LOC110531364 LOC106578119 coding upstream 350244 6885995 ~ 6907134 (-)
LOC118966154 NA coding upstream 419241 6954992 ~ 6957780 (-)
LOC110531380 LOC106578126 coding upstream 427391 6963142 ~ 6969857 (-)
G766701 NA non-coding downstream 56 6530040 ~ 6533107 (-)
G766783 NA non-coding downstream 4484 6527877 ~ 6528679 (-)
G766768 NA non-coding downstream 28270 6504562 ~ 6504893 (-)
G766732 LOC106578083 non-coding downstream 39508 6425194 ~ 6493655 (-)
G766858 NA non-coding upstream 94688 6630439 ~ 6631134 (-)
G766870 NA non-coding upstream 132814 6668565 ~ 6668820 (-)
G766874 NA non-coding upstream 135859 6671610 ~ 6672837 (-)
G766832 NA non-coding upstream 146993 6682744 ~ 6728761 (-)
G766749 NA other downstream 68532 6457203 ~ 6464631 (-)
G766665 NA other downstream 167635 6340621 ~ 6365895 (-)
G766640 NA other downstream 276535 6251597 ~ 6262155 (-)
G766599 LOC106578100 other downstream 323954 6201369 ~ 6209209 (-)
G765579 LOC101077030 other downstream 1234726 5297476 ~ 5298437 (-)
G766850 LOC106578109 other upstream 76328 6612079 ~ 6613412 (-)
G767056 ovol1 other upstream 709893 7245644 ~ 7251075 (-)
LOC110510419 LOC106560462 other upstream 1576837 8112588 ~ 8155916 (-)

Expression


Co-expression Network