Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531378 |
| gene name | LOC106578114 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 7054835 ~ 7065193 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| oocyte zinc finger protein XlCOF6-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021614570.2 | True | 2317 | mRNA | 0.44 | 3 | 7054835 | 7065193 |
7,048,000
7,050,000
7,052,000
7,054,000
7,056,000
7,058,000
7,060,000
7,062,000
7,064,000
7,066,000
7,068,000
7,070,000
7,072,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531367 | LOC106578116 | coding | downstream | 580 | 6970858 ~ 7054255 (-) |
| LOC110531380 | LOC106578126 | coding | downstream | 84978 | 6963142 ~ 6969857 (-) |
| LOC118966154 | NA | coding | downstream | 97055 | 6954992 ~ 6957780 (-) |
| LOC110531364 | LOC106578119 | coding | downstream | 147701 | 6885995 ~ 6907134 (-) |
| LOC110531366 | LOC106578102 | coding | downstream | 171923 | 6851197 ~ 6882912 (-) |
| LOC110531373 | LOC106578114 | coding | upstream | 3334 | 7068527 ~ 7071119 (-) |
| LOC118966172 | NA | coding | upstream | 6764 | 7071957 ~ 7074751 (-) |
| tmem179ba | t179b | coding | upstream | 295716 | 7360909 ~ 7379032 (-) |
| prox3 | LOC106578142 | coding | upstream | 318156 | 7383349 ~ 7390543 (-) |
| snx15 | snx15 | coding | upstream | 342100 | 7407293 ~ 7426803 (-) |
| G766820 | LOC106578118 | non-coding | downstream | 53070 | 7000344 ~ 7001765 (-) |
| G766970 | NA | non-coding | downstream | 56210 | 6998069 ~ 6998625 (-) |
| G766967 | LOC106578121 | non-coding | downstream | 66350 | 6986110 ~ 6988485 (-) |
| G766966 | NA | non-coding | downstream | 69193 | 6985382 ~ 6985642 (-) |
| G766996 | NA | non-coding | upstream | 16734 | 7081927 ~ 7082698 (-) |
| G767002 | NA | non-coding | upstream | 41883 | 7107076 ~ 7107275 (-) |
| G767003 | NA | non-coding | upstream | 44170 | 7109363 ~ 7109608 (-) |
| G767010 | NA | non-coding | upstream | 61558 | 7126751 ~ 7126980 (-) |
| G767012 | LOC105030512 | non-coding | upstream | 64135 | 7129328 ~ 7129866 (-) |
| G766850 | LOC106578109 | other | downstream | 441423 | 6612079 ~ 6613412 (-) |
| G766749 | NA | other | downstream | 590204 | 6457203 ~ 6464631 (-) |
| G766665 | NA | other | downstream | 689307 | 6340621 ~ 6365895 (-) |
| G767056 | ovol1 | other | upstream | 180451 | 7245644 ~ 7251075 (-) |
| LOC110510419 | LOC106560462 | other | upstream | 1047395 | 8112588 ~ 8155916 (-) |
| G768390 | NA | other | upstream | 1124250 | 8189443 ~ 8191898 (-) |
| LOC118936684 | LOC106578100 | other | upstream | 1156338 | 8221531 ~ 8253809 (-) |
| LOC110531377 | LOC106578102 | other | upstream | 1213624 | 8277882 ~ 8283359 (-) |
