LOC118965986


Basic Information

Item Value
gene id LOC118965986
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8060584 ~ 8061856 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118965986
gagaaggagagagagagaaaaagaaggggagagagaaagagaaggagagagagaaagagaaggggagagagaaagagaaggggagagagaaaaagagaaggagagagagagagaaagagaaggagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagagagaaagagaaggagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggggatagagaaagagaaggagagagagagaaagagaaggggagagagagaaagagaaggggatagagaaagagaaggagagagagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagaaagagaaggagagagagagaaagagaaggggagagagagaaaaagaaggggagagagaaagagaaggagagagagagaaaaagaaggggagagagaaagagaaggagagagagaaagagaaggggagagagaaagagaaggggagagagaaaaagagaaggagagagagagagaaagagaaggagagagaaagagaaggagagagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagagagaaagagaaggagagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagagagaaagagaaggggagggagagaaagagaaggggagagagaaagagaaggagagagagagaaagagaaggggatagagaaagagaaggagagagagagaaagagaaggggagagagaaagagaaggggagagagaaagagaaggggagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagaaagagaaggagagagagagaaagagaaggagagagagagagaaagagaaggagagagagagaaagagaaggggagagagagagagagagagagagagaaagagaaggggagagagaaagagaaggagagagaaagagaaggagagagagaggaagagaaggggagagagaaagagaaggagagagagagaaagagaaggggagagagagagagaaggggagagagaaagagaaggagagagagagaaaaagaaggggagagagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118965986 True 1273 mRNA 0.46 1 8060584 8061856

Neighbor

gene id symbol gene type direction distance location
LOC110515519 LOC106578133 coding downstream 186859 7805501 ~ 7873725 (-)
snx15 snx15 coding downstream 633781 7407293 ~ 7426803 (-)
prox3 LOC106578142 coding downstream 670041 7383349 ~ 7390543 (-)
tmem179ba t179b coding downstream 681552 7360909 ~ 7379032 (-)
LOC118966172 NA coding downstream 985833 7071957 ~ 7074751 (-)
LOC118965984 NA coding upstream 370 8062226 ~ 8064024 (-)
LOC118965983 NA coding upstream 4444 8066300 ~ 8067723 (-)
LOC118965985 NA coding upstream 5971 8067827 ~ 8069224 (-)
brms1 LOC106560445 coding upstream 21756 8083612 ~ 8110566 (-)
LOC110510419 LOC106560462 coding upstream 51780 8112588 ~ 8155916 (-)
G767766 NA non-coding downstream 5079 8055263 ~ 8055505 (-)
G767765 NA non-coding downstream 14923 8045443 ~ 8045661 (-)
G767763 NA non-coding downstream 17641 8042718 ~ 8042943 (-)
G767762 NA non-coding downstream 18163 8040835 ~ 8042421 (-)
G767761 NA non-coding downstream 20322 8039913 ~ 8040262 (-)
G767753 NA non-coding upstream 53290 8115146 ~ 8115492 (-)
G767783 NA non-coding upstream 69556 8131412 ~ 8132354 (-)
G767792 NA non-coding upstream 87357 8149213 ~ 8151058 (-)
G767800 NA non-coding upstream 101420 8163276 ~ 8163877 (-)
G767056 ovol1 other downstream 809509 7245644 ~ 7251075 (-)
LOC110531380 LOC106578126 other downstream 1090893 6963142 ~ 6969857 (-)
LOC110531366 LOC106578102 other downstream 1178466 6851197 ~ 6882912 (-)
G766850 LOC106578109 other downstream 1447172 6612079 ~ 6613412 (-)
G766749 NA other downstream 1595953 6457203 ~ 6464631 (-)
G768390 NA other upstream 127587 8189443 ~ 8191898 (-)
LOC118936684 LOC106578100 other upstream 159675 8221531 ~ 8253809 (-)
LOC110531377 LOC106578102 other upstream 216961 8277882 ~ 8283359 (-)
G768780 NA other upstream 920612 8982468 ~ 8990706 (-)

Expression


Co-expression Network