brms1 (LOC106560445)


Basic Information

Item Value
gene id brms1
gene name LOC106560445
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8083612 ~ 8110566 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987243.1
ggttTTGCACatccaaagaatttctgcacaaactgtcagaatccGTCGCAGGGAAGcttatctgcgtgctcgtcgtcctcgcCAGGGTTTTGACCATTCCATTTACtcaattccagacattattatgagtcatcctcccctcagcagcctccactggtgtatatGCAGAAATAAACAGAATTCCTTGAAAACACACAAATTTGTGACGACAGGTTGAATTTCCACTGgttcaataaacatttttttttttaaatgaacctaTTGGTTATCGAGATCTCAGTTCGGCCTCTGATTGGTTAGGGCAGTACAGTAATATCTCACAGGTTGGTTTCTATTGGCTAAGCAGGTATTAGAGCTCTGCATTGATTGGCTAGACTAGAATTTTAGAGTCCGGCAAAAGTAGCAGTAGAACTGAACTGCAACTAAAGGAAGTAGCCTAGTTTGAATATTGTAATGATATACCTGTACTTCATAGTATTGGAGTATAGAAGATACAAACCGTAAAAGtgaTGCCGGCCCAGCCCTCCCTCAGAGAACcacaggaggagatggaggtggagggagagagtgaactACCAGAGGccaatggagagatggaggaagagagggagacagagagaagagagggggaggaggaaaccATGGAGGAGAGtacggaggagagggagagtgactcGGACGAtagcgaggaggaggaagaggaggaagaggagagttcAGagATGGATGATGAggactgtgagaggaggagaggagagtgccTAGATGAGATGTCAGACCTAGAGAAACAGTTCCTGGAACTGAAAGACAAgttgttTCGTGAGCGGTTGAACCAGGTTAAGGTGAAGCTAGATGAGGTGTTGACTGGTAAAGCAGGAGAATACAGAGAACCACTGGCAACACTACAACACAATATGACGCTACGTACCCAGGTGgcaggtgtgtaCAGAGAACTATGTCTGCAGGTGATCCAACACAGGTACGAGTGTGAGCTGCAGGGAGCTCGGCAACACCTGGAGAGCGAGAGGACATTGTTGTTTGATGCTATGAAGACAGAACTGCTGGACAAGATCAGACGGCTGGAGGAGGACAGTCAGAGTGTAGACCTCACATCAGagtGGTGGAGTGATGAGGTGAAAGGGAAGAAGTGTAAAAGGAGGAGTCTGTCCCGgccagagaggaagaagaaggctGCCTTAGTATCTggcCCGTTCATCGTCTACATGTTGAGAGACATTGATATCCTGGAAGACTGGGCAGCTATACAGAAGgcTAAAGCAGCACTGACACCACTAAAGAAGAAATCAGACAagCGGTGATAACAGAGGAGTGTCTCAGATGTCTAGATGAACCAAAGTCTCTGAGTTGCAGAAGAGAactcacaacaacagaacagTCCTGACCACTATTTAAAACAAAGCACTTCAGTAGGGTCTTGTTCAGTAGGGCATACtggaacaaaacatttttttcaacAGAAAATGTAAATCTGtcttcttattggacaagttcaggacAGTACCTCCCTGTTTCAAACAGTTTTGTCCCTACTGAACACAGCCCAGACTATGAAGACGAAGCAACAGATTGATCActtttaggttctgattcatc

Function

NR:

description
breast cancer metastasis-suppressor 1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987243.1 True 1614 mRNA 0.46 9 8083612 8110566

Neighbor

gene id symbol gene type direction distance location
LOC118965985 NA coding downstream 14388 8067827 ~ 8069224 (-)
LOC118965983 NA coding downstream 15889 8066300 ~ 8067723 (-)
LOC118965984 NA coding downstream 19588 8062226 ~ 8064024 (-)
LOC118965986 NA coding downstream 21756 8060584 ~ 8061856 (-)
LOC110515519 LOC106578133 coding downstream 209887 7805501 ~ 7873725 (-)
LOC110510419 LOC106560462 coding upstream 3070 8112588 ~ 8155916 (-)
LOC118936684 LOC106578100 coding upstream 110965 8221531 ~ 8253809 (-)
krcp LOC106578101 coding upstream 144229 8254795 ~ 8266598 (-)
LOC110531377 LOC106578102 coding upstream 167316 8277882 ~ 8283359 (-)
LOC110531375 LOC106578102 coding upstream 173512 8284078 ~ 8288596 (-)
G767752 NA non-coding downstream 14626 8061337 ~ 8068986 (-)
G767766 NA non-coding downstream 28107 8055263 ~ 8055505 (-)
G767765 NA non-coding downstream 37951 8045443 ~ 8045661 (-)
G767763 NA non-coding downstream 40669 8042718 ~ 8042943 (-)
G767762 NA non-coding downstream 41191 8040835 ~ 8042421 (-)
G767753 NA non-coding upstream 4580 8115146 ~ 8115492 (-)
G767783 NA non-coding upstream 20846 8131412 ~ 8132354 (-)
G767792 NA non-coding upstream 38647 8149213 ~ 8151058 (-)
G767800 NA non-coding upstream 52710 8163276 ~ 8163877 (-)
G767056 ovol1 other downstream 832537 7245644 ~ 7251075 (-)
LOC110531380 LOC106578126 other downstream 1113921 6963142 ~ 6969857 (-)
LOC110531366 LOC106578102 other downstream 1201494 6851197 ~ 6882912 (-)
G766850 LOC106578109 other downstream 1470200 6612079 ~ 6613412 (-)
G766749 NA other downstream 1618981 6457203 ~ 6464631 (-)
G768390 NA other upstream 78877 8189443 ~ 8191898 (-)
G768780 NA other upstream 871902 8982468 ~ 8990706 (-)

Expression


Co-expression Network