LOC110531370 (LOC106578104)



Basic Information


Item Value
gene id LOC110531370
gene name LOC106578104
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8301701 ~ 8309914 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021614560.2
tgcgcctctgggtttatAGACTCTGTGGTGTAGCCTTTTTGTCTTCTACCAAACCACGATAAGAAATGTAAGCGTCCGCACAGTGCTTCGAAATAAACTTAGCAATTCCAACGCATGCTCCGGTATCATCACTACTGAATGTCCAGCTATCTCTCTGTCGATTGAAAATGTATAAACTAGATGCGTTTCGTGTGTTTTTAAATGAGCGTTTAACGGCGGCTGTTCTGGAGATTTTCGGGGCAGTTGAGGAAAACGGTAGTGGAGTACCAGGAGGAGAATGATCGGCTACGAATAATGCTGCGGAGGACACCGGAGATACAACTATGTAGAATAGactccctgcagctctctgtctctgaagaGGAGGTTCCCCCTGAGCAGCAGCACTGTGAGCAGGAGTGGAGCCCCAGTCTGGGACAGAAGGACCCAGAGACCAAacagattaaagaggaacaggaggaagtcAGGACCAGTCAGGAGGGAGAGCAGCTTCAAGGGCTCCTTGATACCAAAGACTCCATATTCACTCCTTCCTGTGTGAAAAGTGAATGTGGTCTGGAGAACCCATGTCAAGAAGTCATACTAGCTGAACACCCAACTCTCAGTCCACTGAAAGTGTCTAAACTACAGTCgttttgtgtgtttttaaatgaATGTTTAACGGCATCTGCTGCTATGGAGATTTCCGGTGCAGTTGAGAAAACGGTAGTGGAGTACCAGGAGGAGAATGATCGGCTACGGAGACTGCTGCGGATCACACCAGAGATACAACTATGTAGAATAGacTCCCTGCAGCTCTCTGCCTCTGAAGAGGAGGTTTCCCCTGAGCAGCAGCATTGTGAGCAGGAGTGGAGCCCCAGTCTGGGCCAGAAGGACCCAGAGACTAAacagattaaagaggaacaggaggaagtcaggaccagtcaggaggaagagcagcttcaaGGTCTTGAGCCTGATATCATAGAGTTCAAATTCACTCCTTCCTGTGTGAAAAGTGAATGTGATCAGGAGGACCCACTTCAGTCCTTGACTCTTCCCCAAACTAAGACtgaggaaaacagagagagagactctaaaCCAGTGGATCCCAAACTTTTTGTTACTGTGACCCACTTAAAAGGTCTCAACATTCCCTGTGACCCTCCAGATAATCAAAACAATGCCTTCAGCCACAGTTCAGCTGTAAGCAGTGACCCAGTAGGACTTGACAGTAGCCCACCATTAGATCCCAGTCCACCATTAGATCCCAGTCCACCATTGGATCCCAGTCCACCATTGAGAAAACACCATTCCAAACACAGCACCTGTTCTAAAACAACTCATAGCTGCCATGACTGTGGCAAAAGCTTCAGTATCAAGAAGGACCTAACCAGGCATAAACTGactcacactggagagaaaccatttagctgtggtgaTTGTGGGAAAAGCTTCAGTCAGAAGGGAGACCTAGGGAGGCACATACTGACtcatacaggagagaaaccttttagttgtggtgactgtgggaaaaAATTCAATTGCCACTGGCTCCTAACCAGACATAaactgactcacacaggagagaaaccatttagctgtggtgactgtgggaaaagcttcaatcAGAAGGGTCACCTGAACTTGCACATATTGACTCACACAGGAATaaaaccatttagctgtggtgactgtgggaaaagcttcaatcAGAAGGGTCACCTAAACTTTCATATACGGACTCACACAGGAGTGAATCCATTTAGCTGTGAGGACTGCGATAAAAGCTTCAGAAACAAGGGCACCCTAGCCGAACATATACAGATTCACAAAGGAGAGAAACAACATGGCTGCTCAATCTGTGGCAAAAGTTTCACTCATAAAACAAATCTTCTGAGGCATGTGGATAAAGTCCACAATGGAAGAAAACAGTAATAAAAACTGAAAGACTAAAGAAAATGAGGATAAAGATGTTCTGTCAGAAGATGGGAATAACAGGCAGGATGTGGGCAACACACTTAGGAAAGCAAAGCAAATCTGGATCATTCTTACTTTGGGGTCCAAATGAATAGGTGTGTGATCAAAGGGTACATAGTCACAAGTCTGCTGATCGAAGTCTGTTGATGTTTTCACGTAATTACAAAATAGGAATTCCTG

Function


NR:

description
zinc finger protein 184-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021614560.2 True 2139 mRNA 0.46 3 8301701 8309914

Neighbor


gene id symbol gene type direction distance location
LOC110531374 LOC106578102 coding downstream 6347 8291241 ~ 8295354 (-)
LOC110531375 LOC106578102 coding downstream 13105 8284078 ~ 8288596 (-)
LOC110531377 LOC106578102 coding downstream 18342 8277882 ~ 8283359 (-)
krcp LOC106578101 coding downstream 35103 8254795 ~ 8266598 (-)
LOC118936684 LOC106578100 coding downstream 47892 8221531 ~ 8253809 (-)
LOC118965987 NA coding upstream 9085 8318999 ~ 8321009 (-)
LOC110531383 LOC106578065 coding upstream 14311 8324225 ~ 8330124 (-)
LOC110531384 LOC106578065 coding upstream 30865 8340779 ~ 8343063 (-)
LOC110531390 LOC106578068 coding upstream 46667 8356581 ~ 8400668 (-)
LOC118936450 LOC106578067 coding upstream 108251 8418165 ~ 8422251 (-)
G768425 NA non-coding downstream 25216 8276173 ~ 8276485 (-)
G768414 NA non-coding downstream 54291 8240270 ~ 8247410 (-)
G768407 NA non-coding downstream 76648 8223935 ~ 8225053 (-)
G768406 NA non-coding downstream 78130 8222864 ~ 8223571 (-)
G768402 NA non-coding downstream 80424 8220971 ~ 8221277 (-)
G768483 NA non-coding upstream 48341 8358255 ~ 8365890 (-)
G768504 NA non-coding upstream 98219 8408133 ~ 8408436 (-)
G768528 NA non-coding upstream 149921 8459835 ~ 8501302 (-)
G768554 NA non-coding upstream 179249 8489163 ~ 8489756 (-)
G768390 NA other downstream 109803 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 187631 8112588 ~ 8155916 (-)
G767056 ovol1 other downstream 1050626 7245644 ~ 7251075 (-)
G768780 NA other upstream 672554 8982468 ~ 8990706 (-)
G770225 NA other upstream 2064795 10367459 ~ 10375854 (-)
G770549 NA other upstream 2662459 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 2797914 11107828 ~ 11108159 (-)
G771457 NA other upstream 3318702 11628616 ~ 11629588 (-)

Expression



Co-expression Network