LOC110531383 (LOC106578065)


Basic Information

Item Value
gene id LOC110531383
gene name LOC106578065
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8324225 ~ 8330124 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614573.2
TTTCCAAAATTCCTTGACTAGAACACGGAAGTAGGATTGGAAACGACTGTTTTGATTTTGCATTCCTTGTGTGGGGTAAAGAAATACATACTGACTAAACTGAATAGACTACCCAACTCACATTCGACTGAAAATGTCTAAACTACAATTGTTGAGTGTGTTTTTAAATGAGCGTTTAACGGCGGCTGCTGTGGAGATTTTCGGGGCAGTTGAGAAAACGGTAGTGGAGTACCAGGAGGAGAATGATCGGCTACGGAGACTGCTGGGGATCACACCGGAGATACGACAACGTAAAATAGaaTCCCTGCAGCTCTGTGTCTCTGAAGAGGAGGTTCCCCCTGAGCAGCAGCACTGTGAGCAGGAATGGAGCCCCAGTCTGGGGCAGGAGGACCCAGAGCCCACACAGATTAAAGAGAAGCAAGAGGAACTCAGGACCAGTCAGGAGGAGCTTCGAGGTCTGGAGCCTGATATCATAGAATTCAAATTCACTCCTTCCTGTGTGAAAAGGGAATGTGATCCGGAGGACCCACTTTGGTCCTTGACTCTTCCCCAAATCCAGActgtggagaacagagagagcgacTGTAAACGAGTGGATTTCACACGTTTTGGCACTGTGACCCGCATTAAGGGTCTCAACATTCCCTGTGACCCTCCAGATAATCAGAACAATGCCTTCAGCCACAGTTCAGCTGTAAGCAGCTACACAGGAGGACTTGACAGCAGCCCACCATTTGAGCCTAGCCCATCATTGGATCCAAACCCACCAATGGGGGAACACTATTCCAAACTCAGCACCACGTCTATAAAAACTCACCACTGCCGTGACTGTGGTGAAACGTTTCCTCTGAAAGCTGACCTGCAGAGGCATGTGACTTTTGCCAAGAAGAGAGTCAGCGAATGCCACTTATGCAAAAAACTCTATAACTCCACCTGTAAACTGAAGGCCCATGTCCAACTATGTCATGGTGGTAAACCCTGCACCTGCCCCTTTTGTGGCAAGGCCTTCAAACAAAAAGGACATCTGTCCAGGCACATGAatattcacacaggagagaaaccatttacctgtggtgactgtgggaagagctttATTCAGAAGGGGGACCTAAGGAGGCATAtactgactcacacaggagagaaaccatttagctgtggtgactgtgggaaagGCTTCATTCGCAAAGAGCACCTAACTGCACATGTACGGACTCACACTGGAGAGTAATCATATGGCTGCTCAGTCAGAGGTAAAAGATTAATTCAGATGGTAAACCTGCTGACGCATGTGAGATACATCCACGAAGAAAGAAAATAGGATGAAAACACTAAAAAGAAAGACAGTTAGGACAAAGATCTCCTGTCAGGAGATGGGAATAAAAATGGAGGATGTGAACAACACTCTTAGGAAAGCAAAGCTACTCTGGATCATTCCTTCTGTGGGTTTCAGATAAATAGATACGTGATGGATTTACTTTAGTAAAATGTTTTgtgtaaataaagtttgatttgaattaaAAGTTTAGGAAATTAAA

Function

NR:

description
zinc finger protein 287-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614573.2 True 1535 mRNA 0.45 2 8324225 8330124

Neighbor

gene id symbol gene type direction distance location
LOC118965987 NA coding downstream 3671 8318999 ~ 8321009 (-)
LOC110531370 LOC106578104 coding downstream 14311 8301701 ~ 8309914 (-)
LOC110531374 LOC106578102 coding downstream 28871 8291241 ~ 8295354 (-)
LOC110531375 LOC106578102 coding downstream 35629 8284078 ~ 8288596 (-)
LOC110531377 LOC106578102 coding downstream 40866 8277882 ~ 8283359 (-)
LOC110531384 LOC106578065 coding upstream 10655 8340779 ~ 8343063 (-)
LOC110531390 LOC106578068 coding upstream 26457 8356581 ~ 8400668 (-)
LOC118936450 LOC106578067 coding upstream 88041 8418165 ~ 8422251 (-)
LOC110531388 LOC106578104 coding upstream 107054 8437178 ~ 8443098 (-)
LOC110531389 LOC106578069 coding upstream 119963 8450087 ~ 8457581 (-)
G768425 NA non-coding downstream 47740 8276173 ~ 8276485 (-)
G768414 NA non-coding downstream 76815 8240270 ~ 8247410 (-)
G768407 NA non-coding downstream 99172 8223935 ~ 8225053 (-)
G768406 NA non-coding downstream 100654 8222864 ~ 8223571 (-)
G768483 NA non-coding upstream 28131 8358255 ~ 8365890 (-)
G768504 NA non-coding upstream 78009 8408133 ~ 8408436 (-)
G768528 NA non-coding upstream 129711 8459835 ~ 8501302 (-)
G768554 NA non-coding upstream 159039 8489163 ~ 8489756 (-)
LOC118966156 NA non-coding upstream 201550 8530635 ~ 8533005 (-)
LOC118936684 LOC106578100 other downstream 71470 8221531 ~ 8253809 (-)
G768390 NA other downstream 132327 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 210155 8112588 ~ 8155916 (-)
G767056 ovol1 other downstream 1073150 7245644 ~ 7251075 (-)
G768780 NA other upstream 652344 8982468 ~ 8990706 (-)
G770225 NA other upstream 2044585 10367459 ~ 10375854 (-)
G770549 NA other upstream 2642249 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 2777704 11107828 ~ 11108159 (-)
G771457 NA other upstream 3298492 11628616 ~ 11629588 (-)

Expression


Co-expression Network