hspa12b (LOC106578073)


Basic Information

Item Value
gene id hspa12b
gene name LOC106578073
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8489987 ~ 8533713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987225.1
TTGTACAAACCTTTTCCCtgttttccgtgtgtgtgtgtatatccgtgtgtgtgtgtatatccgtgtgtgtgtgtgtgtgtgtataacttcTTTCTTCTCTGACATTCCAGGCCAGTTGAAAGACTGACTGCCGGGCTGCGGACACAGCAGAGGAACGCTCCAGGCAAAGATTTGGGAATATTTGGGATCGTTCCATAATTTTTTCAGGAAAGTTTCCCCCTCCTTCTGCTCCATTGGACTTTTCCAAAGTATTTGTTGAACTATTTTACCCTCCTATTTCTATTGTCGGTTCTTTTTTGGAATTCTGCTCTTGGAATTCTGCTCTTGGAATTCTGCCGACGTTCGGTTCCATCTGGGAGGTTGAACATTCCCAGTGATTCCTGATCCCTGCAGCAGaagcatcctctcctctctctctgtctctccttagTTCTGCTCCAGTGAAGAACAAGGGCAGGAACATTGTTTCAGGAAAAGACAGGCTGTCCTGGCCGTGGCAACCCTCATCATGGCCGACATCCTGCAGCCCGACATGAACAGCCTACAGGtcccagGTGAAAACAACCGTATATcagctccctcctctccctcagtcggACGAAATGACTGCAGCATCGCACCCCTCACACCCTCAGCCTCTCCGagacCGGAGGCCAGATCGAGGATGGATCATCCGTTCACTGTGGTGGTAGCTATAGACTTTGGAACCACCTCCAGCGGCTATGCATTCAGCTTCACACAAGACCCAGAGGCTATTCACATGATGAGGCGCTGGGAGGGCGGGGACCCGGGCGTAGCCAACCAGAAGAGCCCCACGTCCCTGTTATTGACCCCTGAGTTGAAGTTCCATAGTTTTGGGTTTGCTGCCAGAGACAACTATCATGATCTGGATCCTGAAGAGGCTCAACACTGGCTCTACTTCGACAAGTTCAAAATGAAGATACATAGTACCACTGATCTGACCATGGAGACAGAGCTGGAAGCGGTGAGTGGGAGGAAGGTGAGGGCCATCGAGGTATTCTCTCACGCTCTCCGGTTCTTCAGAGTACACGCCCTGAAGGAGGTGAAGGACCAGTCTTCGTCTCTATTGGAGGGAGATGAGGTGAGATGGGTGATCACTGTTCCTGCTGTGTGGAGACAACCAGCCAAACAGTTCATGAGAGAGGCTGCCTATCTGgctGGTCTGGTATCTCCTGACACTCCAGAACAGCTCCTGATAGCTCTCGAACCTGAAGCAGCTTCCATCTACTGTCGCAAGCTCCGCCTACACCAGGTGATTGACCTGAGCCTCCGGCCAATGACCAATGGTCTCAGCTTGGAGAGCGACGGGTCCCGCCCTTTTGACTCCAGCTTCAgacaagcgcGTGAGCAGCTGAGGAAAGCGAGACACAGCAGAACTTTCCTggtggagagagggactggagaACTCTGGTCAGAGATGCAGACTGGTGACCGGTACATAGTGGCAGACTGTGGAGGAggaacagtagacctgacagttcACCAGATAGAGCAGCCCCAGGGGACACTGAAGGAACTCTACAAGGTCTCAGGAGGTCCATACGGGGCGGTCGGCGTCGACCTAGCCTTTGAAGCCATGCTTTGTAAGATCTTCGGAGAGGACTTTATCGAGAGCTTCAAGGCGAAGCGTCCCGCTGCATGGGTCGACCTGACCATCGCGTTCGAGGCTCGTAAACGCACGGCCACGCCGGGGCGATCCAACGCCCTGAATATCTCTCTGCCCTTCTCCTTTATCGACTTCTACAAAAGATACAGAGGACAGAGTGTGGAGACTGCCCTGCGCAAGAGCAAcatgaACATAGTGAAGTGGTCGTCTCAGGGAATGCTACGTCTCACTCCTGAAGCCATGAACGAACTGTTCCAACCCACCATTAACAACATCATCAAACACattgaggaGTTGATGCAGAGACAGGAAGTGCAGGGTGTTCGCTTCCTGTTCCTGGTTGGGGGTTTCGCTGAGTCGCCCATGCTGCAGCGGGCTGCCCAGAATGCTTTGGGTCAAACGTGTCGCATCATCATCCCTCAGGATGTGGGTCTGACCATACTGAAAGGGGCTGTGTTGTTCGGACTGGACCCCACCGTGGTGCGTGTGCGTCGTTGCCCTCTGACCTACGGCGTTGGGGTTCTAAATCGCTTCGTGGAGGGTCGACACCCCCGGGACAAACTACTGGTCAAGGAAGGCCGTGATTGGTGCACCGACATCCTCGACAGATTCGTCTCCGTTGACCAATCAGTGGCTTTAGGCGAGGTCGTGAGGCGGAGCTACACACCGGCTAGaTCCGGCCAGAGGAAGATCATCATCAATATCTACTGCAGCGTCAGCGACGACGTTGTTTACATCAGCGACCCTGGAGTGAGGAAGTGTGGCGCGATCACTCTGGATCTACCGGAGGCGTTGCCGGGGACGGTTGCCGGGGCGGAAAGGAGAGAGATCCGAGCCACAATGCAGTTCGGAGACACAGAGATCAAAGTGACGGCGGTGGACATGGCGACCAATCAGACGGTCCGAGCCGCCATCGACTTCCTTTCAAATTGAGGAGACTGACCACAATGTCAAAGGGTAAAGAAGGAGAAAGTAGGAAATGGACCCACGAGGAATAACGTCAAAGATCCAGGATCAATTAAATGTTTTAACATTGAGTTATGGCACGATGTGACATTTTAAGTGACGACATGACCTTCGAACTGCTCAACATCACAATTCCTTTCTCACATCGAAAACAAAACATCTcaatctgatctaggatcaggtccctctgGGAGTGACTGCTGCCTGAATATATTGGGCTTGTTGGAGACCACTGCCGAATCCTGACCAATCACCTTGaatcataaataactactcatgACTACTTGTAGATAAGTCAGTCAGCATTTACCCACTATGCATCACGGATCAAATCCTTGCTCTCGAACATTGCCATAGACTCTTGCCTGTATCTAGTTCCAGTGTCTCTGTCTTCAAGTCAActgataataaaataataatactaatgTCTTTGTTGTAGTGCCACCTTGTGGCCACTGGATTGAATGACCAACTGAACACGCCTTTTACTTTCTCTGTATGGAGAAATTAACTGAACTGTGGACTGGTTGTGACGAGGACTGACATGAATATGCTATGAATATATCTGAACCATTGATTGTATACACTAGTAATTTAGACCTTTTATATACAGTTTGCTTGAAGGAAATGTAGGCTTCctggaaaaacaccaaataaGGTATGATCACAACAGTATTTAAGTTGTGTACAGTACATGCCAATATCCTGATGGGTCCTGTATTTTATACCCATATGAAATATTATCATTTTATGTATAAAGAACTATCTTAAGAAA
>XM_036987227.1
GTTGTACAAACCTTTTCCCtgttttccgtgtgtgtgtgtatatccgtgtgtgtgtgtatatccgtgtgtgtgtgtgtgtgtgtataacttcTTTCTTCTCTGACATTCCAGGCCAGTTGAAAGACTGACTGCCGGGCTGCGGACACAGCAGAGGAACGCTCCAGGCAAAGATTTGGGAATATTTGGGATCGTTCCATAATTTTTTCAGGAAAGTTTCCCCCTCCTTCTGCTCCATTGGACTTTTCCAAAGTATTTGTTGAACTATTTTACCCTCCTATTTCTATTGTCGGTTCTTTTTTGGAATTCTGCTCTTGGAATTCTGCTCTTGGAATTCTGCCGACGTTCGGTTCCATCTGGGAGGTTGAACATTCCCAGTGATTCCTGATCCCTGCAGCAGaagcatcctctcctctctctctgtctctccttagTTCTGCTCCAGTGAAGAACAAGGGCAGGAACATTGTTTCAGGAAAAGACAGCCCGACATGAACAGCCTACAGGtcccagGTGAAAACAACCGTATATcagctccctcctctccctcagtcggACGAAATGACTGCAGCATCGCACCCCTCACACCCTCAGCCTCTCCGagacCGGAGGCCAGATCGAGGATGGATCATCCGTTCACTGTGGTGGTAGCTATAGACTTTGGAACCACCTCCAGCGGCTATGCATTCAGCTTCACACAAGACCCAGAGGCTATTCACATGATGAGGCGCTGGGAGGGCGGGGACCCGGGCGTAGCCAACCAGAAGAGCCCCACGTCCCTGTTATTGACCCCTGAGTTGAAGTTCCATAGTTTTGGGTTTGCTGCCAGAGACAACTATCATGATCTGGATCCTGAAGAGGCTCAACACTGGCTCTACTTCGACAAGTTCAAAATGAAGATACATAGTACCACTGATCTGACCATGGAGACAGAGCTGGAAGCGGTGAGTGGGAGGAAGGTGAGGGCCATCGAGGTATTCTCTCACGCTCTCCGGTTCTTCAGAGTACACGCCCTGAAGGAGGTGAAGGACCAGTCTTCGTCTCTATTGGAGGGAGATGAGGTGAGATGGGTGATCACTGTTCCTGCTGTGTGGAGACAACCAGCCAAACAGTTCATGAGAGAGGCTGCCTATCTGgctGGTCTGGTATCTCCTGACACTCCAGAACAGCTCCTGATAGCTCTCGAACCTGAAGCAGCTTCCATCTACTGTCGCAAGCTCCGCCTACACCAGGTGATTGACCTGAGCCTCCGGCCAATGACCAATGGTCTCAGCTTGGAGAGCGACGGGTCCCGCCCTTTTGACTCCAGCTTCAgacaagcgcGTGAGCAGCTGAGGAAAGCGAGACACAGCAGAACTTTCCTggtggagagagggactggagaACTCTGGTCAGAGATGCAGACTGGTGACCGGTACATAGTGGCAGACTGTGGAGGAggaacagtagacctgacagttcACCAGATAGAGCAGCCCCAGGGGACACTGAAGGAACTCTACAAGGTCTCAGGAGGTCCATACGGGGCGGTCGGCGTCGACCTAGCCTTTGAAGCCATGCTTTGTAAGATCTTCGGAGAGGACTTTATCGAGAGCTTCAAGGCGAAGCGTCCCGCTGCATGGGTCGACCTGACCATCGCGTTCGAGGCTCGTAAACGCACGGCCACGCCGGGGCGATCCAACGCCCTGAATATCTCTCTGCCCTTCTCCTTTATCGACTTCTACAAAAGATACAGAGGACAGAGTGTGGAGACTGCCCTGCGCAAGAGCAAcatgaACATAGTGAAGTGGTCGTCTCAGGGAATGCTACGTCTCACTCCTGAAGCCATGAACGAACTGTTCCAACCCACCATTAACAACATCATCAAACACattgaggaGTTGATGCAGAGACAGGAAGTGCAGGGTGTTCGCTTCCTGTTCCTGGTTGGGGGTTTCGCTGAGTCGCCCATGCTGCAGCGGGCTGCCCAGAATGCTTTGGGTCAAACGTGTCGCATCATCATCCCTCAGGATGTGGGTCTGACCATACTGAAAGGGGCTGTGTTGTTCGGACTGGACCCCACCGTGGTGCGTGTGCGTCGTTGCCCTCTGACCTACGGCGTTGGGGTTCTAAATCGCTTCGTGGAGGGTCGACACCCCCGGGACAAACTACTGGTCAAGGAAGGCCGTGATTGGTGCACCGACATCCTCGACAGATTCGTCTCCGTTGACCAATCAGTGGCTTTAGGCGAGGTCGTGAGGCGGAGCTACACACCGGCTAGaTCCGGCCAGAGGAAGATCATCATCAATATCTACTGCAGCGTCAGCGACGACGTTGTTTACATCAGCGACCCTGGAGTGAGGAAGTGTGGCGCGATCACTCTGGATCTACCGGAGGCGTTGCCGGGGACGGTTGCCGGGGCGGAAAGGAGAGAGATCCGAGCCACAATGCAGTTCGGAGACACAGAGATCAAAGTGACGGCGGTGGACATGGCGACCAATCAGACGGTCCGAGCCGCCATCGACTTCCTTTCAAATTGAGGAGACTGACCACAATGTCAAAGGGTAAAGAAGGAGAAAGTAGGAAATGGACCCACGAGGAATAACGTCAAAGATCCAGGATCAATTAAATGTTTTAACATTGAGTTATGGCACGATGTGACATTTTAAGTGACGACATGACCTTCGAACTGCTCAACATCACAATTCCTTTCTCACATCGAAAACAAAACATCTcaatctgatctaggatcaggtccctctgGGAGTGACTGCTGCCTGAATATATTGGGCTTGTTGGAGACCACTGCCGAATCCTGACCAATCACCTTGaatcataaataactactcatgACTACTTGTAGATAAGTCAGTCAGCATTTACCCACTATGCATCACGGATCAAATCCTTGCTCTCGAACATTGCCATAGACTCTTGCCTGTATCTAGTTCCAGTGTCTCTGTCTTCAAGTCAActgataataaaataataatactaatgTCTTTGTTGTAGTGCCACCTTGTGGCCACTGGATTGAATGACCAACTGAACACGCCTTTTACTTTCTCTGTATGGAGAAATTAACTGAACTGTGGACTGGTTGTGACGAGGACTGACATGAATATGCTATGAATATATCTGAACCATTGATTGTATACACTAGTAATTTAGACCTTTTATATACAGTTTGCTTGAAGGAAATGTAGGCTTCctggaaaaacaccaaataaGGTATGATCACAACAGTATTTAAGTTGTGTACAGTACATGCCAATATCCTGATGGGTCCTGTATTTTATACCCATATGAAATATTATCATTTTATGTATAAAGAACTATCTTAAGAAA
>XM_036987226.1
gcataTTCTAAATGAGGCCAGTTGAAAGACTGACTGCCGGGCTGCGGACACAGCAGAGGAACGCTCCAGGCAAAGATTTGGGAATATTTGGGATCGTTCCATAATTTTTTCAGGAAAGTTTCCCCCTCCTTCTGCTCCATTGGACTTTTCCAAAGTATTTGTTGAACTATTTTACCCTCCTATTTCTATTGTCGGTTCTTTTTTGGAATTCTGCTCTTGGAATTCTGCTCTTGGAATTCTGCCGACGTTCGGTTCCATCTGGGAGGTTGAACATTCCCAGTGATTCCTGATCCCTGCAGCAGaagcatcctctcctctctctctgtctctccttagTTCTGCTCCAGTGAAGAACAAGGGCAGGAACATTGTTTCAGGAAAAGACAGGCTGTCCTGGCCGTGGCAACCCTCATCATGGCCGACATCCTGCAGCCCGACATGAACAGCCTACAGGtcccagGTGAAAACAACCGTATATcagctccctcctctccctcagtcggACGAAATGACTGCAGCATCGCACCCCTCACACCCTCAGCCTCTCCGagacCGGAGGCCAGATCGAGGATGGATCATCCGTTCACTGTGGTGGTAGCTATAGACTTTGGAACCACCTCCAGCGGCTATGCATTCAGCTTCACACAAGACCCAGAGGCTATTCACATGATGAGGCGCTGGGAGGGCGGGGACCCGGGCGTAGCCAACCAGAAGAGCCCCACGTCCCTGTTATTGACCCCTGAGTTGAAGTTCCATAGTTTTGGGTTTGCTGCCAGAGACAACTATCATGATCTGGATCCTGAAGAGGCTCAACACTGGCTCTACTTCGACAAGTTCAAAATGAAGATACATAGTACCACTGATCTGACCATGGAGACAGAGCTGGAAGCGGTGAGTGGGAGGAAGGTGAGGGCCATCGAGGTATTCTCTCACGCTCTCCGGTTCTTCAGAGTACACGCCCTGAAGGAGGTGAAGGACCAGTCTTCGTCTCTATTGGAGGGAGATGAGGTGAGATGGGTGATCACTGTTCCTGCTGTGTGGAGACAACCAGCCAAACAGTTCATGAGAGAGGCTGCCTATCTGgctGGTCTGGTATCTCCTGACACTCCAGAACAGCTCCTGATAGCTCTCGAACCTGAAGCAGCTTCCATCTACTGTCGCAAGCTCCGCCTACACCAGGTGATTGACCTGAGCCTCCGGCCAATGACCAATGGTCTCAGCTTGGAGAGCGACGGGTCCCGCCCTTTTGACTCCAGCTTCAgacaagcgcGTGAGCAGCTGAGGAAAGCGAGACACAGCAGAACTTTCCTggtggagagagggactggagaACTCTGGTCAGAGATGCAGACTGGTGACCGGTACATAGTGGCAGACTGTGGAGGAggaacagtagacctgacagttcACCAGATAGAGCAGCCCCAGGGGACACTGAAGGAACTCTACAAGGTCTCAGGAGGTCCATACGGGGCGGTCGGCGTCGACCTAGCCTTTGAAGCCATGCTTTGTAAGATCTTCGGAGAGGACTTTATCGAGAGCTTCAAGGCGAAGCGTCCCGCTGCATGGGTCGACCTGACCATCGCGTTCGAGGCTCGTAAACGCACGGCCACGCCGGGGCGATCCAACGCCCTGAATATCTCTCTGCCCTTCTCCTTTATCGACTTCTACAAAAGATACAGAGGACAGAGTGTGGAGACTGCCCTGCGCAAGAGCAAcatgaACATAGTGAAGTGGTCGTCTCAGGGAATGCTACGTCTCACTCCTGAAGCCATGAACGAACTGTTCCAACCCACCATTAACAACATCATCAAACACattgaggaGTTGATGCAGAGACAGGAAGTGCAGGGTGTTCGCTTCCTGTTCCTGGTTGGGGGTTTCGCTGAGTCGCCCATGCTGCAGCGGGCTGCCCAGAATGCTTTGGGTCAAACGTGTCGCATCATCATCCCTCAGGATGTGGGTCTGACCATACTGAAAGGGGCTGTGTTGTTCGGACTGGACCCCACCGTGGTGCGTGTGCGTCGTTGCCCTCTGACCTACGGCGTTGGGGTTCTAAATCGCTTCGTGGAGGGTCGACACCCCCGGGACAAACTACTGGTCAAGGAAGGCCGTGATTGGTGCACCGACATCCTCGACAGATTCGTCTCCGTTGACCAATCAGTGGCTTTAGGCGAGGTCGTGAGGCGGAGCTACACACCGGCTAGaTCCGGCCAGAGGAAGATCATCATCAATATCTACTGCAGCGTCAGCGACGACGTTGTTTACATCAGCGACCCTGGAGTGAGGAAGTGTGGCGCGATCACTCTGGATCTACCGGAGGCGTTGCCGGGGACGGTTGCCGGGGCGGAAAGGAGAGAGATCCGAGCCACAATGCAGTTCGGAGACACAGAGATCAAAGTGACGGCGGTGGACATGGCGACCAATCAGACGGTCCGAGCCGCCATCGACTTCCTTTCAAATTGAGGAGACTGACCACAATGTCAAAGGGTAAAGAAGGAGAAAGTAGGAAATGGACCCACGAGGAATAACGTCAAAGATCCAGGATCAATTAAATGTTTTAACATTGAGTTATGGCACGATGTGACATTTTAAGTGACGACATGACCTTCGAACTGCTCAACATCACAATTCCTTTCTCACATCGAAAACAAAACATCTcaatctgatctaggatcaggtccctctgGGAGTGACTGCTGCCTGAATATATTGGGCTTGTTGGAGACCACTGCCGAATCCTGACCAATCACCTTGaatcataaataactactcatgACTACTTGTAGATAAGTCAGTCAGCATTTACCCACTATGCATCACGGATCAAATCCTTGCTCTCGAACATTGCCATAGACTCTTGCCTGTATCTAGTTCCAGTGTCTCTGTCTTCAAGTCAActgataataaaataataatactaatgTCTTTGTTGTAGTGCCACCTTGTGGCCACTGGATTGAATGACCAACTGAACACGCCTTTTACTTTCTCTGTATGGAGAAATTAACTGAACTGTGGACTGGTTGTGACGAGGACTGACATGAATATGCTATGAATATATCTGAACCATTGATTGTATACACTAGTAATTTAGACCTTTTATATACAGTTTGCTTGAAGGAAATGTAGGCTTCctggaaaaacaccaaataaGGTATGATCACAACAGTATTTAAGTTGTGTACAGTACATGCCAATATCCTGATGGGTCCTGTATTTTATACCCATATGAAATATTATCATTTTATGTATAAAGAACTATCTTAAGAAA

Function

NR:

description
heat shock 70 kDa protein 12B-like

GO:

id name namespace
GO:0002040 sprouting angiogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987225.1 False 3368 mRNA 0.50 16 8489987 8533674
XM_036987227.1 False 3324 mRNA 0.50 16 8489987 8533675
XM_036987226.1 True 3274 mRNA 0.50 17 8489987 8533713

Neighbor

gene id symbol gene type direction distance location
LOC110531389 LOC106578069 coding downstream 32406 8450087 ~ 8457581 (-)
LOC110531388 LOC106578104 coding downstream 46889 8437178 ~ 8443098 (-)
LOC118936450 LOC106578067 coding downstream 67736 8418165 ~ 8422251 (-)
LOC110531390 LOC106578068 coding downstream 89319 8356581 ~ 8400668 (-)
LOC110531384 LOC106578065 coding downstream 146924 8340779 ~ 8343063 (-)
nagk nagk coding upstream 32843 8566556 ~ 8580576 (-)
LOC110532904 m1ap coding upstream 105786 8639499 ~ 8684971 (-)
LOC118966157 NA coding upstream 168325 8702038 ~ 8717338 (-)
phka1a LOC106578056 coding upstream 490000 9023713 ~ 9077363 (-)
leap2 leap-2a coding upstream 549663 9083247 ~ 9145704 (-)
G768554 NA non-coding downstream 231 8489163 ~ 8489756 (-)
G768504 NA non-coding downstream 81551 8408133 ~ 8408436 (-)
G768483 NA non-coding downstream 124097 8358255 ~ 8365890 (-)
LOC118965987 NA non-coding downstream 168978 8318999 ~ 8321009 (-)
G768425 NA non-coding downstream 213502 8276173 ~ 8276485 (-)
G768591 NA non-coding upstream 41953 8575666 ~ 8575993 (-)
G768610 NA non-coding upstream 96903 8630616 ~ 8726033 (-)
G768611 NA non-coding upstream 104220 8637933 ~ 8638389 (-)
G768651 NA non-coding upstream 194803 8728516 ~ 8730832 (-)
G768662 NA non-coding upstream 216101 8749814 ~ 8751739 (-)
LOC110531377 LOC106578102 other downstream 206663 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 237232 8221531 ~ 8253809 (-)
G768390 NA other downstream 298089 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 375917 8112588 ~ 8155916 (-)
G767056 ovol1 other downstream 1238912 7245644 ~ 7251075 (-)
G768780 NA other upstream 448755 8982468 ~ 8990706 (-)
G770225 NA other upstream 1840996 10367459 ~ 10375854 (-)
G770549 NA other upstream 2438660 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 2574115 11107828 ~ 11108159 (-)
G771457 NA other upstream 3094903 11628616 ~ 11629588 (-)

Expression


Co-expression Network