LOC110532904 (m1ap)


Basic Information

Item Value
gene id LOC110532904
gene name m1ap
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8639499 ~ 8684971 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987250.1
GCCCGCGCGCAGCTGTCTTGGCGGGAGAGCGCGAGCCACGTATACTTTTCAAACAATCTGAAAATAACCTCgttattttaaattaatttttatttattttttttacagctaAAACTAATGTGTCTTTTGGCTAAATAATCAGAACATACACCAGGACAGGGAATTCAATAAGAAACACGAAAAGAAAAGTACATTTCAGAGATCCTGATTCCGTCGTTGCCATGGACGCAAGGAACCGCTCtggccccccctcctcctccttccaggTGTGCCGCCCCTCCTTGTTCTCACGGCAACCGCCCCGTGTTCTGATCGTGGACGCGTCACCGCCCTGGTGGTCAGAGACTGGTACTACGCTGTGTGAGGCTTTGGATAACTTCCTGACTCTGGCCTGTAGTCTGGACGGACCCTGTAGACTGCCCCTGCTTAGCCTTTACGCTCTGAGTAGACAGCATGAATGTCTGCTGCCATTCGTGCAGGTGAGGGGTAACCTGGCCCGACTGCGTTCCTGTGTGGAGGAGCTGAGGTCCATACCCGGAGAGGGGTGCGTCCGCGCACCTAGAGGGGAACTGCTCAAACAGGCTGTTTTGGACAGCCTGCAGCAGTTTAAACAGTACACGCGACACACTACCACTCCGAACCAGGCCAACAACAATGGATCTGTAGAGGTAACCGTGGTGACGAGCCAGCCAGGGCGTGGCGTGGTGAGGCAGTTGGAGGCGGGCTTAAAGGACACTGACTTGGTGTCTCTACGACGCCTACTAGTGGTCCACGTCAGTACTGCAGggagagaggagactgactGCTGCGGGCAGGACACACCCTCACCCGAGACTGCAGAGGAGACTGAAGccaGTCTGATGTTAGGTACAGAGATCGACCTGCAgcatgtagagaacagtgtgattgCCATGGAGATGGTGTTGAAGGCGTGGCTTCATGACCAGGGCGGGAAAAAGGAACAACTCCACCTGTTGTTACCACCTGGACTACAGGGAGAGATTACTACACCTAGTCATGGACAGAGAGCTAGTCCAGtgtgtgtgaagtgtgacATGCAGGAGCGTCTCCTAAGCCCCGCCCTCttacctctgacccctgaccttggGGTCAAGACGGAGAGCACCAAGGACTTCCTGGTGTCAGGCAAGGGCTTGGCCAATCAGAGCCCTCCGCCTCAGAGACTCAGAGTCAtcaagtaagagagagagagagactgacagagagagagagggagagacagagagagagggagagacagagagagagggagagacagagagagagggagagacagacagagagggagagagagactgac
>XM_036987251.1
TGCCCGCGCGCAGCTGTCTTGGCGGGAGAGCGCGAGCCACGTATACTTTTCAAACAATCTGAAAATAACCTCgttattttaaattaatttttatttattttttttacagctaAAACTAATGTGTCTTTTGGCTAAATAATCAGAACATACACCAGGACAGGGAATTCAATAAGAAACACGAAAAGAAAAGTACATTTCAGAGATCCTGATTCCGTCGTTGCCATGGACGCAAGGAACCGCTCtggccccccctcctcctccttccaggTGTGCCGCCCCTCCTTGTTCTCACGGCAACCGCCCCGTGTTCTGATCGTGGACGCGTCACCGCCCTGGTGGTCAGAGACTGGTACTACGCTGTGTGAGGCTTTGGATAACTTCCTGACTCTGGCCTGTAGTCTGGACGGACCCTGTAGACTGCCCCTGCTTAGCCTTTACGCTCTGAGTAGACAGCATGAATGTCTGCTGCCATTCGTGCAGGTGAGGGGTAACCTGGCCCGACTGCGTTCCTGTGTGGAGGAGCTGAGGTCCATACCCGGAGAGGGGTGCGTCCGCGCACCTAGAGGGGAACTGCTCAAACAGGCTGTTTTGGACAGCCTGCAGCAGTTTAAACAGTACACGCGACACACTACCACTCCGAACCAGGCCAACAACAATGGATCTGTAGAGGTAACCGTGGTGACGAGCCAGCCAGGGCGTGGCGTGGTGAGGCAGTTGGAGGCGGGCTTAAAGGACACTGACTTGGTGTCTCTACGACGCCTACTAGTGGTCCACGTCAGTACTGCAGccaGTCTGATGTTAGGTACAGAGATCGACCTGCAgcatgtagagaacagtgtgattgCCATGGAGATGGTGTTGAAGGCGTGGCTTCATGACCAGGGCGGGAAAAAGGAACAACTCCACCTGTTGTTACCACCTGGACTACAGGGAGAGATTACTACACCTAGTCATGGACAGAGAGCTAGTCCAGtgtgtgtgaagtgtgacATGCAGGAGCGTCTCCTAAGCCCCGCCCTCttacctctgacccctgaccttggGGTCAAGACGGAGAGCACCAAGGACTTCCTGGTGTCAGGCAAGGGCTTGGCCAATCAGAGCCCTCCGCCTCAGAGACTCAGAGTCAtcaagtaagagagagagagagactgacagagagagagagggagagacagagagagagggagagacagagagagagggagagacagagagagagggagagacagacagagagggagagagagactgac
>XM_036987252.1
TGCCCGCGCGCAGCTGTCTTGGCGGGAGAGCGCGAGCCACGTATACTTTTCAAACAATCTGAAAATAACCTCgttattttaaattaatttttatttattttttttacagctaAAACTAATGTGTCTTTTGGCTAAATAATCAGAACATACACCAGGACAGGGAATTCAATAAGAAACACGAAAAGAAAAGTACATTTCAGAGATCCTGATTCCGTCGTTGCCATGGACGCAAGGAACCGCTCtggccccccctcctcctccttccagCAGGTGAGGGGTAACCTGGCCCGACTGCGTTCCTGTGTGGAGGAGCTGAGGTCCATACCCGGAGAGGGGTGCGTCCGCGCACCTAGAGGGGAACTGCTCAAACAGGCTGTTTTGGACAGCCTGCAGCAGTTTAAACAGTACACGCGACACACTACCACTCCGAACCAGGCCAACAACAATGGATCTGTAGAGGTAACCGTGGTGACGAGCCAGCCAGGGCGTGGCGTGGTGAGGCAGTTGGAGGCGGGCTTAAAGGACACTGACTTGGTGTCTCTACGACGCCTACTAGTGGTCCACGTCAGTACTGCAGggagagaggagactgactGCTGCGGGCAGGACACACCCTCACCCGAGACTGCAGAGGAGACTGAAGccaGTCTGATGTTAGGTACAGAGATCGACCTGCAgcatgtagagaacagtgtgattgCCATGGAGATGGTGTTGAAGGCGTGGCTTCATGACCAGGGCGGGAAAAAGGAACAACTCCACCTGTTGTTACCACCTGGACTACAGGGAGAGATTACTACACCTAGTCATGGACAGAGAGCTAGTCCAGtgtgtgtgaagtgtgacATGCAGGAGCGTCTCCTAAGCCCCGCCCTCttacctctgacccctgaccttggGGTCAAGACGGAGAGCACCAAGGACTTCCTGGTGTCAGGCAAGGGCTTGGCCAATCAGAGCCCTCCGCCTCAGAGACTCAGAGTCAtcaagtaagagagagagagagactgacagagagagagagggagagacagagagagagggagagacagagagagagggagagacagagagagagggagagacagacagagagggagagagagactgac

Function

symbol description
m1ap Predicted to be involved in male meiosis chromosome separation and spermatogenesis. Predicted to act upstream of or within meiosis I. Human ortholog(s) of this gene implicated in spermatogenic failure 48. Orthologous to human M1AP (meiosis 1 associated protein).

NR:

description
PREDICTED: meiosis 1 arrest protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987250.1 False 1321 mRNA 0.54 7 8639499 8684970
XM_036987251.1 False 1256 mRNA 0.53 6 8639499 8684971
XM_036987252.1 True 1112 mRNA 0.53 7 8639499 8684971

Neighbor

gene id symbol gene type direction distance location
nagk nagk coding downstream 58923 8566556 ~ 8580576 (-)
hspa12b LOC106578073 coding downstream 105786 8489987 ~ 8533713 (-)
LOC118966156 NA coding downstream 107081 8530635 ~ 8533005 (-)
LOC110531389 LOC106578069 coding downstream 181918 8450087 ~ 8457581 (-)
LOC110531388 LOC106578104 coding downstream 196401 8437178 ~ 8443098 (-)
LOC118966157 NA coding upstream 17067 8702038 ~ 8717338 (-)
phka1a LOC106578056 coding upstream 338742 9023713 ~ 9077363 (-)
leap2 leap-2a coding upstream 398405 9083247 ~ 9145704 (-)
bmp15 LOC106578107 coding upstream 419263 9104234 ~ 9107459 (-)
LOC110531417 LOC106578044 coding upstream 609793 9294764 ~ 9348258 (-)
G768611 NA non-coding downstream 1110 8637933 ~ 8638389 (-)
G768591 NA non-coding downstream 63506 8575666 ~ 8575993 (-)
G768528 NA non-coding downstream 138197 8459835 ~ 8501302 (-)
G768554 NA non-coding downstream 149743 8489163 ~ 8489756 (-)
G768651 NA non-coding upstream 43545 8728516 ~ 8730832 (-)
G768662 NA non-coding upstream 64843 8749814 ~ 8751739 (-)
G768672 NA non-coding upstream 82408 8767379 ~ 8767685 (-)
G768673 NA non-coding upstream 83883 8768854 ~ 8769062 (-)
G768674 NA non-coding upstream 84927 8769898 ~ 8770167 (-)
LOC110531377 LOC106578102 other downstream 356175 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 386744 8221531 ~ 8253809 (-)
G768390 NA other downstream 447601 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 525429 8112588 ~ 8155916 (-)
G767056 ovol1 other downstream 1388424 7245644 ~ 7251075 (-)
G768780 NA other upstream 297497 8982468 ~ 8990706 (-)
G770225 NA other upstream 1689738 10367459 ~ 10375854 (-)
G770549 NA other upstream 2287402 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 2422857 11107828 ~ 11108159 (-)
G771457 NA other upstream 2943645 11628616 ~ 11629588 (-)

Expression


Co-expression Network