LOC118965990


Basic Information

Item Value
gene id LOC118965990
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 10135529 ~ 10137709 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053163.1
agaaaacattaaggacacccctctaccctcaccatcatcctaccatcagactggatagaaaacattaaggacacccctctaccctcaccatcatcctaccatcagactggatagaaaacattaaggacacccctCTACCCTCACCATCCTACCATCAGACTGAatagaaaacattaaggacacccctCTACCCTCACCATCCTCCCAACTCTCGGCTGCTTCTCGTGTATTTTTGTCTGTCCatggagagagctagagaacTGTTGAccgcatctgaaatggcaccctgttccctatcaAGTGCACTACTGCCCTAAGGGCCCCGGTTAAAAGTAGGGGCCTACAGTATTTagagaataggttgccatttgggaacaTTCCTGATGTAAAATgtttctatcccctcctctctactgcGTCTGTATCTTGTAAAAACAGTTTCCTCATCCTGCTGTGCCCTCGAATTTTGACGGATtcatgcttacacacacacacacacaggcatgcaataACGTGTacatacagatgtacacacatgcatgtagcacgttacacacacacacacacacacatgcagaaacacacactgAACAATGTTAGATTTTTCTGGGATAATTCTGGTGGTAATAAtgtcaatttttatttttatatatattttttagcatAATGTCATTACTCGTTATGTATTGTTTTAAAGCGATGCGCTGTCAATTTTCCTCCCAAATTTGAAGATGTCATATGAAAGGATGTCCAAGTAACTTCTGGTGTCAAGGGATGATGTCCTGTTGTTGAGTCTAAGACAACTCCCATAACGGGTGCTTCACGGTGTTCTGAACAGTCCGTGTGTCAAGGGATGATGTCCTGTTGTTGAGTCTAAGACAACTCCCATAACGGGTGCTTCACGGTGTTCTGAACAGTCTGTGTGTCAAGGGATGATGTCCTGTTGTTGAGTCTAAGACAACTCCCATAACGGGTGCTTCACGGTGTTCTGAACAGTCTGTGTGTCAAGGGATGATGTCCTGTTGTTGAGTCTAAGACAACTCCCATAACGGGTGCTTCACGGTGTTCTGAACAGTCCGTGTGTCAAGGGATGATGTCCTGTTGTTGAGTCTAAGACAACTCCCATAACGGGTGCTTCACGGTGTTCTGAACAGTCCGTGTGTCAAGGTTGTTACTGGTTCACATTCTGAACCTTATTGCCAAGGGTTACTTtattgtttaatactttttgggACACATGGAGTGTAAAATGGACAAGCCACTACTGGTTTGATAACACTCTGGTTCCCAGATTGCTTTATGAAAGGATGTCAGTGTAACTATTGGGGCTCAGGTGAAACAGGTGTGGGGTTAACATCTTTTGGACAAATGGCCACAATTTCCACCGTCGTAATTCCCCTGTATAAAACGCATTGGTGTGTTTTCCTGCTCATGCCACGTGTTGCTCACCCAGGgctgttttctgtctgtttccTGGATCTTGGTAGCAGGTCTGTTTCCTGGATCTTGGTAGCAGGTCTGTTTCCTGGATCTTGGAAGCAGGTCTGTTTCCTGGATCTTGGAAGCAGGTCTGTTTCCTGGATCTTGGTAGCAGGTCTGTGCTCTCTTGCCAACTTCTTATGTAATTGTCATGCTAAATGCTGACCGTGGAGTAGGCaaaagcacaaacagacctgggaccaggctaatatcTTGGCGCTGAAGTCTATGATGACTATGCCACCTGATGTACGTACAGCTCTAGATTCTTCCTCTGGTCTCCAATGCCTGTCTAGTATGTACTGCTTTCTCAGCTTTGCTCGCAAGTCCAACCTCTCCAAACACCTGCTTAGACGTCATAAACCTAAATGATAATGATGTATATTAACATAACACCTTTTATGAAACTCTGTTACTCTCTTCCTCTGGTCTCATCCAGTGCCTGTCTAGTATGTACAGCTCTAGATTCTTCCTCTGGTCTCTCCAATGCCTGTCTAGTACGTACAGCTCTAGATTCTTCCTCTGGTCTCATCCAGTGCCGGGTAGATTATAGTTATAAAATATCCCCCTCCTTGTATACTGTCAGGTAGACCCAGCTCTAGAATTACCCCCAAGGTGCTGTCTCTTCTTCGTTCTCCTTTAGATACGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053163.1 True 2129 mRNA 0.45 2 10135529 10137709

Neighbor

gene id symbol gene type direction distance location
LOC118965989 NA coding downstream 5084 10116536 ~ 10130445 (-)
LOC110531429 LOC106578053 coding downstream 147079 9983492 ~ 9988450 (-)
LOC110531417 LOC106578044 coding downstream 787271 9294764 ~ 9348258 (-)
bmp15 LOC106578107 coding downstream 1028070 9104234 ~ 9107459 (-)
leap2 leap-2a coding downstream 1048232 9083247 ~ 9145704 (-)
LOC110531425 LOC106578047 coding upstream 2914 10140623 ~ 10213285 (-)
LOC110531433 LOC106578048 coding upstream 103516 10241225 ~ 10247265 (-)
LOC110531436 LOC106578050 coding upstream 124584 10262293 ~ 10273980 (-)
LOC118965991 NA coding upstream 128088 10265797 ~ 10267703 (-)
LOC118965993 NA coding upstream 523681 10661390 ~ 10664564 (-)
G770140 NA non-coding downstream 34683 10100642 ~ 10100846 (-)
G770139 NA non-coding downstream 34995 10099903 ~ 10100534 (-)
G770118 NA non-coding downstream 96773 10038190 ~ 10038756 (-)
G770099 NA non-coding downstream 115293 10020037 ~ 10020236 (-)
G770173 NA non-coding upstream 43928 10181637 ~ 10182200 (-)
G770174 NA non-coding upstream 47520 10185229 ~ 10186424 (-)
G770183 NA non-coding upstream 96407 10234116 ~ 10234358 (-)
G770112 NA non-coding upstream 100289 10237998 ~ 10238457 (-)
G770110 NA non-coding upstream 102131 10239840 ~ 10241076 (-)
G768780 NA other downstream 1144823 8982468 ~ 8990706 (-)
LOC110531377 LOC106578102 other downstream 1852205 8277882 ~ 8283359 (-)
LOC118936684 LOC106578100 other downstream 1882774 8221531 ~ 8253809 (-)
G768390 NA other downstream 1943631 8189443 ~ 8191898 (-)
LOC110510419 LOC106560462 other downstream 2021459 8112588 ~ 8155916 (-)
G770225 NA other upstream 237000 10367459 ~ 10375854 (-)
G770549 NA other upstream 834664 10972373 ~ 10974413 (-)
G770627 LOC106577876 other upstream 970119 11107828 ~ 11108159 (-)
G771457 NA other upstream 1490907 11628616 ~ 11629588 (-)
LOC110531452 LOC106577886 other upstream 1560690 11698392 ~ 11701613 (-)

Expression


Co-expression Network