Gene
RNA
| Item | Value |
|---|---|
| gene id | trnal-aag |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 11970169 ~ 11970250 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnal-aag | True | 82 | mRNA | 0.59 | 1 | 11970169 | 11970250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532912 | LOC106577883 | coding | downstream | 181404 | 11759145 ~ 11788765 (-) |
| LOC110531453 | LOC106577884 | coding | downstream | 219942 | 11741911 ~ 11750227 (-) |
| LOC110531452 | LOC106577886 | coding | downstream | 268556 | 11698392 ~ 11701613 (-) |
| LOC110531450 | med11 | coding | downstream | 309336 | 11658664 ~ 11660833 (-) |
| LOC110531444 | LOC106577924 | coding | downstream | 434730 | 11495542 ~ 11535439 (-) |
| LOC110531465 | LOC107666294 | coding | upstream | 155977 | 12092145 ~ 12144786 (-) |
| LOC110531459 | LOC106577897 | coding | upstream | 177244 | 12147494 ~ 12153015 (-) |
| trnas-uga-2 | NA | coding | upstream | 215382 | 12185486 ~ 12185735 (-) |
| trnaw-cca-4 | NA | coding | upstream | 228457 | 12198707 ~ 12198778 (-) |
| sox19b | LOC106577904 | coding | upstream | 466090 | 12436340 ~ 12441768 (-) |
| G771613 | NA | non-coding | downstream | 158 | 11969603 ~ 11970011 (-) |
| G771608 | NA | non-coding | downstream | 7616 | 11954652 ~ 11962553 (-) |
| G771603 | NA | non-coding | downstream | 20877 | 11948011 ~ 11949292 (-) |
| G771602 | NA | non-coding | downstream | 23568 | 11945296 ~ 11946601 (-) |
| G771601 | NA | non-coding | downstream | 25837 | 11944088 ~ 11944332 (-) |
| G771615 | NA | non-coding | upstream | 1330 | 11971580 ~ 11971856 (-) |
| G771618 | NA | non-coding | upstream | 8639 | 11978889 ~ 11979216 (-) |
| G771620 | NA | non-coding | upstream | 10259 | 11980509 ~ 11980962 (-) |
| G771635 | NA | non-coding | upstream | 38049 | 12008299 ~ 12009204 (-) |
| G771639 | LOC106577893 | non-coding | upstream | 51467 | 12021717 ~ 12032123 (-) |
| G771540 | LOC106577916 | other | downstream | 81454 | 11870589 ~ 11916867 (-) |
| G771457 | NA | other | downstream | 340581 | 11628616 ~ 11629588 (-) |
| G770627 | LOC106577876 | other | downstream | 862010 | 11107828 ~ 11108159 (-) |
| G771614 | NA | other | upstream | 654 | 11970904 ~ 11971354 (-) |
| G772877 | LOC106577934 | other | upstream | 1024019 | 12994269 ~ 12996410 (-) |
| G773163 | NA | other | upstream | 1620003 | 13586326 ~ 13666937 (-) |
| G773168 | NA | other | upstream | 1726929 | 13697179 ~ 13699328 (-) |
| LOC110531538 | NA | other | upstream | 2010078 | 13977459 ~ 13987582 (-) |
