XLOC_026600


Basic Information

Item Value
gene id XLOC_026600
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36320239 ~ 36323625 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053070
TGCGAAGCTCTGAATGCAGACGTAAACTCCGACAGCCGATGACATTCTCTGAATCCCGATCACGTCATCTTCAGCCAGCATGGGGATGTGACTGGAGGCCACAGTGCCCAGCAGGAACCCGTACAAACAAGAACAGGACATGAGCCCCCAAAACTCTGAGACGAAGGTGAAGACCACCAGCACCGGACATAGCAGCACTGTGCAGATCAGCAGGATGTAGATTTTGCGGATGGGCTTGCGATTGAGGACCCAGCCCATGGACAAACGACCCCCAATCTCAGCCACGGCCATAGCGGACAGCATGTAGGTGGCGCTTTTCTGAGATACTCCTCGACTTACACTCAGCTGAATGATGTAGATCTGTGGTGCGAAGAAGCCCAGTGTTGCGAACAGACCAAACAGTGCATAGCAgagatggg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053070 True 419 lncRNA 0.54 2 36320239 36323625

Neighbor

gene id symbol gene type direction distance location
XLOC_026599 prkar1aa coding downstream 47569 36262593 ~ 36272670 (-)
XLOC_026598 rac3a coding downstream 60137 36248851 ~ 36260102 (-)
XLOC_026597 gps1 coding downstream 73264 36234060 ~ 36246975 (-)
XLOC_026596 csnk1da coding downstream 109895 36173203 ~ 36210344 (-)
XLOC_026595 BX897685.1 coding downstream 148271 36170943 ~ 36171968 (-)
XLOC_026601 gna13b coding upstream 8954 36332579 ~ 36364903 (-)
XLOC_026602 cog1 coding upstream 77480 36401105 ~ 36420397 (-)
XLOC_026603 rogdi coding upstream 104363 36427988 ~ 36440705 (-)
XLOC_026604 glyr1 coding upstream 117681 36441306 ~ 36458165 (-)
XLOC_026605 ppl coding upstream 136165 36459790 ~ 36481986 (-)
XLOC_026588 NA non-coding downstream 745788 35565128 ~ 35574451 (-)
XLOC_026585 NA non-coding downstream 1372178 34947402 ~ 34948061 (-)
XLOC_026580 NA non-coding downstream 1678266 34641048 ~ 34641973 (-)
XLOC_026572 NA non-coding downstream 2179058 34139637 ~ 34141181 (-)
XLOC_026558 BX649502.11 non-coding downstream 2233756 34086041 ~ 34086483 (-)
XLOC_026606 NA non-coding upstream 259475 36583100 ~ 36587136 (-)
XLOC_026612 FO744883.1 non-coding upstream 432408 36756033 ~ 36756149 (-)
XLOC_026617 NA non-coding upstream 630000 36953625 ~ 36954088 (-)
XLOC_026618 CT573704.1 non-coding upstream 644246 36967871 ~ 36967993 (-)
XLOC_026619 NA non-coding upstream 645778 36969403 ~ 36972222 (-)

Expression


Co-expression Network