Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966197 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12470976 ~ 12471118 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053463.1 | True | 143 | mRNA | 0.48 | 1 | 12470976 | 12471118 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sox19b | LOC106577904 | coding | downstream | 29208 | 12436340 ~ 12441768 (-) |
| trnaw-cca-4 | NA | coding | downstream | 272198 | 12198707 ~ 12198778 (-) |
| trnas-uga-2 | NA | coding | downstream | 285263 | 12185486 ~ 12185735 (-) |
| LOC110531459 | LOC106577897 | coding | downstream | 317961 | 12147494 ~ 12153015 (-) |
| LOC110531465 | LOC107666294 | coding | downstream | 326190 | 12092145 ~ 12144786 (-) |
| LOC118966200 | NA | coding | upstream | 2550 | 12473668 ~ 12473792 (-) |
| LOC118966199 | NA | coding | upstream | 4389 | 12475507 ~ 12475649 (-) |
| senp3b | LOC106577906 | coding | upstream | 13643 | 12484761 ~ 12507741 (-) |
| LOC110531481 | LOC106577909 | coding | upstream | 81007 | 12552125 ~ 12562614 (-) |
| LOC110531482 | LOC106577910 | coding | upstream | 95264 | 12566380 ~ 12583501 (-) |
| G772599 | NA | non-coding | downstream | 8370 | 12462392 ~ 12462606 (-) |
| G771840 | NA | non-coding | downstream | 54132 | 12415730 ~ 12416844 (-) |
| G771836 | NA | non-coding | downstream | 57181 | 12412512 ~ 12413795 (-) |
| G771830 | NA | non-coding | downstream | 67840 | 12402395 ~ 12403136 (-) |
| G771829 | NA | non-coding | downstream | 68731 | 12401798 ~ 12402245 (-) |
| G772608 | NA | non-coding | upstream | 10341 | 12481459 ~ 12481903 (-) |
| G772619 | NA | non-coding | upstream | 38103 | 12509221 ~ 12509435 (-) |
| G772620 | NA | non-coding | upstream | 38608 | 12509726 ~ 12509981 (-) |
| G772621 | NA | non-coding | upstream | 38931 | 12510049 ~ 12510423 (-) |
| G772622 | NA | non-coding | upstream | 39738 | 12510856 ~ 12511070 (-) |
| G771614 | NA | other | downstream | 499622 | 11970904 ~ 11971354 (-) |
| G771540 | LOC106577916 | other | downstream | 582261 | 11870589 ~ 11916867 (-) |
| LOC110532912 | LOC106577883 | other | downstream | 682407 | 11759145 ~ 11788765 (-) |
| LOC110531452 | LOC106577886 | other | downstream | 769393 | 11698392 ~ 11701613 (-) |
| G771457 | NA | other | downstream | 841388 | 11628616 ~ 11629588 (-) |
| G772877 | LOC106577934 | other | upstream | 523151 | 12994269 ~ 12996410 (-) |
| G773163 | NA | other | upstream | 1119135 | 13586326 ~ 13666937 (-) |
| G773168 | NA | other | upstream | 1226061 | 13697179 ~ 13699328 (-) |
| LOC110531538 | NA | other | upstream | 1509210 | 13977459 ~ 13987582 (-) |
| LOC118966145 | LOC106599223 | other | upstream | 1778283 | 14249401 ~ 14254157 (-) |
