Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966200 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12473668 ~ 12473792 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053466.1 | True | 125 | mRNA | 0.52 | 1 | 12473668 | 12473792 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966197 | NA | coding | downstream | 2550 | 12470976 ~ 12471118 (-) |
| sox19b | LOC106577904 | coding | downstream | 31900 | 12436340 ~ 12441768 (-) |
| trnaw-cca-4 | NA | coding | downstream | 274890 | 12198707 ~ 12198778 (-) |
| trnas-uga-2 | NA | coding | downstream | 287955 | 12185486 ~ 12185735 (-) |
| LOC110531459 | LOC106577897 | coding | downstream | 320653 | 12147494 ~ 12153015 (-) |
| LOC118966199 | NA | coding | upstream | 1715 | 12475507 ~ 12475649 (-) |
| senp3b | LOC106577906 | coding | upstream | 10969 | 12484761 ~ 12507741 (-) |
| LOC110531481 | LOC106577909 | coding | upstream | 78333 | 12552125 ~ 12562614 (-) |
| LOC110531482 | LOC106577910 | coding | upstream | 92590 | 12566380 ~ 12583501 (-) |
| LOC110531484 | LOC106577912 | coding | upstream | 122093 | 12595885 ~ 12635228 (-) |
| G772599 | NA | non-coding | downstream | 11062 | 12462392 ~ 12462606 (-) |
| G771840 | NA | non-coding | downstream | 56824 | 12415730 ~ 12416844 (-) |
| G771836 | NA | non-coding | downstream | 59873 | 12412512 ~ 12413795 (-) |
| G771830 | NA | non-coding | downstream | 70532 | 12402395 ~ 12403136 (-) |
| G771829 | NA | non-coding | downstream | 71423 | 12401798 ~ 12402245 (-) |
| G772608 | NA | non-coding | upstream | 7667 | 12481459 ~ 12481903 (-) |
| G772619 | NA | non-coding | upstream | 35429 | 12509221 ~ 12509435 (-) |
| G772620 | NA | non-coding | upstream | 35934 | 12509726 ~ 12509981 (-) |
| G772621 | NA | non-coding | upstream | 36257 | 12510049 ~ 12510423 (-) |
| G772622 | NA | non-coding | upstream | 37064 | 12510856 ~ 12511070 (-) |
| G771614 | NA | other | downstream | 502314 | 11970904 ~ 11971354 (-) |
| G771540 | LOC106577916 | other | downstream | 584953 | 11870589 ~ 11916867 (-) |
| LOC110532912 | LOC106577883 | other | downstream | 685099 | 11759145 ~ 11788765 (-) |
| LOC110531452 | LOC106577886 | other | downstream | 772085 | 11698392 ~ 11701613 (-) |
| G771457 | NA | other | downstream | 844080 | 11628616 ~ 11629588 (-) |
| G772877 | LOC106577934 | other | upstream | 520477 | 12994269 ~ 12996410 (-) |
| G773163 | NA | other | upstream | 1116461 | 13586326 ~ 13666937 (-) |
| G773168 | NA | other | upstream | 1223387 | 13697179 ~ 13699328 (-) |
| LOC110531538 | NA | other | upstream | 1506536 | 13977459 ~ 13987582 (-) |
| LOC118966145 | LOC106599223 | other | upstream | 1775609 | 14249401 ~ 14254157 (-) |
