XLOC_026606


Basic Information

Item Value
gene id XLOC_026606
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36583100 ~ 36587136 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053071
CCTTGCTAGCcaaatcaaattttaaatattgtatgaTGATGAGCAACATTGGCCCAGCAACgtccatcaacacacacacacacagcaacattCATAATAATACATACAAAATCCCCCAAAAATCCGATCTGTGAAATGAAATCCAAAGCACACCTCACACGTTTGTTCtgactttattaaaaacattaaaagaaaGATATTTAGGCCACACATATGATGCAATCTAGTTCAATCACAGGACTACATGTCGGCATCTGTAGAGCATGTGCTgttattaacatcaacaaaccATCTGCGTAaccgtgtacacacacacacatcctcagCAAATGATTGATCGCATCttattacatattgatataattgACTGTAAGTCCTATACGGCGAGACAAAAGAGCCAAATACAGTGTGCTTATGAAAACAGTAACCTGAACCGTGGCCTTTGTTGGGCTTGAATGGGCGAATTCAGGGTGGAGCTGCAATATGACTCTGTTTCTCCATATGCTTGTGCCATGACGAACCAAATCCTGCTCAGTTTACCTGGAATATAAGAAGCTTTTAAGGCGTTTGACACGTGCGCAGAAGGATTAGTCTTTGATTAGTTTATACTACTGATGGTTGAGTGATTACTATGATACTTGTGTGGTTTTTTTCCAGTCTTCGCATTACAATTGTGATCATAACTCTATGCTTTGAGTTCAGATATTGTGGATGATCTGGTTCATCTGGAGGCTCTATTGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053071 True 741 lncRNA 0.39 2 36583100 36587136

Neighbor

gene id symbol gene type direction distance location
XLOC_026605 ppl coding downstream 101114 36459790 ~ 36481986 (-)
XLOC_026604 glyr1 coding downstream 124935 36441306 ~ 36458165 (-)
XLOC_026603 rogdi coding downstream 142395 36427988 ~ 36440705 (-)
XLOC_026602 cog1 coding downstream 162703 36401105 ~ 36420397 (-)
XLOC_026601 gna13b coding downstream 218197 36332579 ~ 36364903 (-)
XLOC_026607 rrn3 coding upstream 2291 36589427 ~ 36602500 (-)
XLOC_026608 si:dkeyp-72e1.6 coding upstream 18013 36605149 ~ 36606884 (-)
XLOC_026609 si:dkeyp-72e1.7 coding upstream 22949 36610085 ~ 36612877 (-)
XLOC_026610 myh11b coding upstream 80666 36667802 ~ 36711708 (-)
XLOC_026611 abcc6b.1 coding upstream 157382 36744518 ~ 36750068 (-)
XLOC_026600 NA non-coding downstream 259475 36320239 ~ 36323625 (-)
XLOC_026588 NA non-coding downstream 1008649 35565128 ~ 35574451 (-)
XLOC_026585 NA non-coding downstream 1635039 34947402 ~ 34948061 (-)
XLOC_026580 NA non-coding downstream 1941127 34641048 ~ 34641973 (-)
XLOC_026572 NA non-coding downstream 2441919 34139637 ~ 34141181 (-)
XLOC_026612 FO744883.1 non-coding upstream 168897 36756033 ~ 36756149 (-)
XLOC_026617 NA non-coding upstream 366489 36953625 ~ 36954088 (-)
XLOC_026618 CT573704.1 non-coding upstream 380735 36967871 ~ 36967993 (-)
XLOC_026619 NA non-coding upstream 382267 36969403 ~ 36972222 (-)
XLOC_026621 CT573704.2 non-coding upstream 488562 37075698 ~ 37075813 (-)

Expression


Co-expression Network