LOC110531533 (LOC106577984)


Basic Information

Item Value
gene id LOC110531533
gene name LOC106577984
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 13864720 ~ 13880101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989189.1
ATTTTATCCGGAAGCAAAGTGAAAGCAGATAAGAGACAACACATTCAAAGGACACCATACTGTATTCTAGCTAAATCCAAAGATGGGGAATACACAGAGTGTCCTTAAGAAGAAAGGATACACTATCCTGAGGAAGGTAGAGAATGGTGTCATTGGTACTGACAAAAATGGGGACCAGTTTGTCATTAAAGAGATCAAACTGAATGAGAACTCAGTCATGAACTCCAGTGCTGGAGACATAATCGATGAGGTTGAAACTCTCCTGCAGATAAATCACCCCCATATTTCAAGCCATAAGAACTCTTTCCAAGATGATGAAAGTTACTATGTAGTGATGGACCATTGTGACGGTGGAAATCTTGCACAGAAGATCAAAGAGGGGAACCCATTTTCAGAAGAACAGATCATGGACTGGTTTGTCAAGATCTGCATGGCTCTGAAGCATGTGCATGAACTGGGCCTTCTTCACAGAGACCTGAGACCACAGAATATATTCCTCACAACATTTGGGACACTTTGTTTGGGAGATTTCGGAAGAGTCAATGAAAATGCTTCCCAATCTGAATCTTCAAAAGATGGAATGCTGGGTTATTTAGGCCCAGAGATTCTGACTGGTGGAATTTATGACACTAAAAGTGATATTTGGTCCTTGGGATGTGTGCTGTATGAGTTGTGTGTGCTTCAGAGTGCATTCACTGCAGCAAGCACAATAGAGCTCATTCCCAAAATACTGGGGGGTCCTTACCCATCTCTCCCAGAGTGTTTCTCACCTGAGCTCCATCAAGTACTGTGTGACATCTTCCAACAAGAACCGACCAGTAGACCTTCAGCTGGTGAAATCCTGGCAAAACCCTTCATTATTAGTTTCCTCACAAAAAAGAATGAAAAAACTGTGGAGGAGCTCCAGACAAACTTGAACACTCTGAGAACTCTGGCAGACGGCTTGGAGTGTGTGCACCAGGGCACCACCATAGGCAGTCTGACTGGAGGTGTTATTGGGGCAGCTGGAGGAATCACTTCCATAGTAGGCCTCATCCTGGCTCCCTTCACTTTGGGCGCCTCCCTGATCGTCACAGGAGTGGGTGTTGGGGTGGCTGTCTTTGGTGGAGCCACAGCCGGAGTATCCAACATCACCAACATGGTCAATCAGTCTACCGACCGCAAAGCCATCAAGAACATCATCAAGGAGTTCCAGGAGAAGATGAACTCTGTGGTGACATCTCTACAAAACATCGCTGAGGGTTTGGAGACACCGCGGATGAGTGGCTCCTTTACCACAGAAAGAGACATTTTAAATGCAGAGAAGCTAGCAAATGCTGGGGCGAGGGTTGGGAGGGGCCTAGGGAGCATCCCAGAGCTTGTCCGATTGGTCCATGTGGCCTCCATTGGCAAGGTGGCAGCTCAAACTGCAAGGGCAGTGCGTGTTCTAGAGATGGCAACAGGAATATTCTCTGCTTTCTTTGTAGCAGTTGATATCTTCTTCATCGCCATGGATGCAAAAGAGATCCACAACATACGACAGGCGAAGGCTGAGAAACAGTCTAGTGAAAGCAGTAAGTTACACTTGATGGACACAGACTCCATGACTAAGCTGAACCCTGAATGTGAAGAACCAAAGGCTGAGGTCAAGTCAGAGACCATGAAGTTCATCCAGACGAtcagacagacagctgatcaGCTACAGCAGTGCCTGGACGAGCTGAGTGATGTCATCTCATTCATTCCTAAGATAGAGGGCTGTCACTTAGACAATTGAAACTATACTCAGTCGTAGTGATTGTAAAAGAATCAGAAACAAGAAATAGAGCAGATTGAATCAGTCCTTGATACACAATTTCACTGTAAAACACCCTGTAAAACACAGGTGTGGGCGGTGGTACTTTGACACCCAGATAGGCCTTTCGGTTTAAATTCTGAGCAAAATCCCTTTTCTGTTCTTCAATTCTTGCAAAAATCAGCTCTGATAGTAAGTAGGTTGTAGAAACATaagtatacagtatatctcagcTTTAGTACTGAAGCACTTTCCTTTCAGGTTATTACAGTTGACATGATTTGAtctgtacattttttttctcGCGTAAAACGATATCAGGTGTATTACACAACTACAAAAGTGTCAGTTGTTTCAATCTAATAATAGCCTACATGAAGTGGTGATGGTGATTGTATAAAAGTGTAATTGTTGCAATGAAAGATTTAGTCATTTTTAGGAAATTATCCTGGGTAACAACATATATATAATACAATCATAATCTATAAATGTCTGCTTCAAAAAATAAAAAGCATGTTTTAAACTCAA
>XM_036989188.1
CATTTTGAAAGAGGAGTATTTCATATTTTATCCGGAAGCAAAGTGAAAGCAGATAAGAGACAACACATTCAAAGCTAAATCCAAAGATGGGGAATACACAGAGTGTCCTTAAGAAGAAAGGATACACTATCCTGAGGAAGGTAGAGAATGGTGTCATTGGTACTGACAAAAATGGGGACCAGTTTGTCATTAAAGAGATCAAACTGAATGAGAACTCAGTCATGAACTCCAGTGCTGGAGACATAATCGATGAGGTTGAAACTCTCCTGCAGATAAATCACCCCCATATTTCAAGCCATAAGAACTCTTTCCAAGATGATGAAAGTTACTATGTAGTGATGGACCATTGTGACGGTGGAAATCTTGCACAGAAGATCAAAGAGGGGAACCCATTTTCAGAAGAACAGATCATGGACTGGTTTGTCAAGATCTGCATGGCTCTGAAGCATGTGCATGAACTGGGCCTTCTTCACAGAGACCTGAGACCACAGAATATATTCCTCACAACATTTGGGACACTTTGTTTGGGAGATTTCGGAAGAGTCAATGAAAATGCTTCCCAATCTGAATCTTCAAAAGATGGAATGCTGGGTTATTTAGGCCCAGAGATTCTGACTGGTGGAATTTATGACACTAAAAGTGATATTTGGTCCTTGGGATGTGTGCTGTATGAGTTGTGTGTGCTTCAGAGTGCATTCACTGCAGCAAGCACAATAGAGCTCATTCCCAAAATACTGGGGGGTCCTTACCCATCTCTCCCAGAGTGTTTCTCACCTGAGCTCCATCAAGTACTGTGTGACATCTTCCAACAAGAACCGACCAGTAGACCTTCAGCTGGTGAAATCCTGGCAAAACCCTTCATTATTAGTTTCCTCACAAAAAAGAATGAAAAAACTGTGGAGGAGCTCCAGACAAACTTGAACACTCTGAGAACTCTGGCAGACGGCTTGGAGTGTGTGCACCAGGGCACCACCATAGGCAGTCTGACTGGAGGTGTTATTGGGGCAGCTGGAGGAATCACTTCCATAGTAGGCCTCATCCTGGCTCCCTTCACTTTGGGCGCCTCCCTGATCGTCACAGGAGTGGGTGTTGGGGTGGCTGTCTTTGGTGGAGCCACAGCCGGAGTATCCAACATCACCAACATGGTCAATCAGTCTACCGACCGCAAAGCCATCAAGAACATCATCAAGGAGTTCCAGGAGAAGATGAACTCTGTGGTGACATCTCTACAAAACATCGCTGAGGGTTTGGAGACACCGCGGATGAGTGGCTCCTTTACCACAGAAAGAGACATTTTAAATGCAGAGAAGCTAGCAAATGCTGGGGCGAGGGTTGGGAGGGGCCTAGGGAGCATCCCAGAGCTTGTCCGATTGGTCCATGTGGCCTCCATTGGCAAGGTGGCAGCTCAAACTGCAAGGGCAGTGCGTGTTCTAGAGATGGCAACAGGAATATTCTCTGCTTTCTTTGTAGCAGTTGATATCTTCTTCATCGCCATGGATGCAAAAGAGATCCACAACATACGACAGGCGAAGGCTGAGAAACAGTCTAGTGAAAGCAGTAAGTTACACTTGATGGACACAGACTCCATGACTAAGCTGAACCCTGAATGTGAAGAACCAAAGGCTGAGGTCAAGTCAGAGACCATGAAGTTCATCCAGACGAtcagacagacagctgatcaGCTACAGCAGTGCCTGGACGAGCTGAGTGATGTCATCTCATTCATTCCTAAGATAGAGGGCTGTCACTTAGACAATTGAAACTATACTCAGTCGTAGTGATTGTAAAAGAATCAGAAACAAGAAATAGAGCAGATTGAATCAGTCCTTGATACACAATTTCACTGTAAAACACCCTGTAAAACACAGGTGTGGGCGGTGGTACTTTGACACCCAGATAGGCCTTTCGGTTTAAATTCTGAGCAAAATCCCTTTTCTGTTCTTCAATTCTTGCAAAAATCAGCTCTGATAGTAAGTAGGTTGTAGAAACATaagtatacagtatatctcagcTTTAGTACTGAAGCACTTTCCTTTCAGGTTATTACAGTTGACATGATTTGAtctgtacattttttttctcGCGTAAAACGATATCAGGTGTATTACACAACTACAAAAGTGTCAGTTGTTTCAATCTAATAATAGCCTACATGAAGTGGTGATGGTGATTGTATAAAAGTGTAATTGTTGCAATGAAAGATTTAGTCATTTTTAGGAAATTATCCTGGGTAACAACATATATATAATACAATCATAATCTATAAATGTCTGCTTCAAAAAATAAAAAGCATGTTTTAAACTCAA

Function

NR:

description
serine/threonine-protein kinase Nek5-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989189.1 False 2302 mRNA 0.43 10 13864720 13880077
XM_036989188.1 True 2306 mRNA 0.43 10 13864720 13880101

Neighbor

gene id symbol gene type direction distance location
LOC110531530 NA coding downstream 33199 13823424 ~ 13831521 (-)
LOC110531528 LOC106577965 coding downstream 53872 13801901 ~ 13810848 (-)
LOC110531527 LOC106577964 coding downstream 62819 13791610 ~ 13801901 (-)
LOC118966161 LOC106577963 coding downstream 76118 13780974 ~ 13788602 (-)
LOC110532926 LOC106577966 coding downstream 86115 13765868 ~ 13778605 (-)
LOC110531536 NA coding upstream 42743 13917998 ~ 13943754 (-)
LOC110531537 LOC106577970 coding upstream 66210 13946311 ~ 13969993 (-)
LOC110531538 NA coding upstream 97358 13977459 ~ 13987582 (-)
LOC110531539 NA coding upstream 109681 13988898 ~ 14002060 (-)
LOC110531549 NA coding upstream 142549 14022650 ~ 14025846 (-)
G773313 NA non-coding downstream 21325 13788968 ~ 13843395 (-)
G773163 NA non-coding downstream 197783 13586326 ~ 13666937 (-)
G773164 NA non-coding downstream 205835 13654981 ~ 13658885 (-)
G773165 LOC106577955 non-coding downstream 261662 13601083 ~ 13603058 (-)
G773200 NA non-coding downstream 306538 13557972 ~ 13558182 (-)
G773390 NA non-coding upstream 27645 13907746 ~ 13907952 (-)
G773395 NA non-coding upstream 35438 13915539 ~ 13916036 (-)
G773403 NA non-coding upstream 54871 13934972 ~ 13935501 (-)
G773405 NA non-coding upstream 56833 13936934 ~ 13937373 (-)
G773168 NA other downstream 165392 13697179 ~ 13699328 (-)
G772877 LOC106577934 other downstream 868310 12994269 ~ 12996410 (-)
G771614 NA other downstream 1893366 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 1976005 11870589 ~ 11916867 (-)
LOC118966145 LOC106599223 other upstream 369300 14249401 ~ 14254157 (-)
G774427 LOC106578022 other upstream 843953 14724054 ~ 14724522 (-)
G774562 LOC106577809 other upstream 1357957 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 1472206 15352307 ~ 15361319 (-)

Expression


Co-expression Network