LOC110532929 (LOC106578030)


Basic Information

Item Value
gene id LOC110532929
gene name LOC106578030
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14042284 ~ 14044513 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989256.1
TATATCGTGTCACGTGTGATTTTTGTGATTTCATTTGACATTTCTGtgttaaaacgtttttttttctttATCCCTGTAGTAAATGTCGTGGTGAAAGGAGTGGCCACCCAGTCATCACTGTATGGGGATGGCCAGGCTAACAATGCTATTGATGGCAACAGAGAATCAAACTATCACAAAATATcctgcacacacactgaacagGAGACCAACCCCTGGCGGAGAGTGGACCTGCTGGATGTGTACAGAGTGACAGCTGTCACCATCACCAACAGAGGAGACTGCTGTCCTGAGAGACTTGATGGTGCTGAGATCTGCATCGGTAACTCACTGGAGAACAACGGCATCAACAACCCCAGTTCCTTCAGATGTGTTGTCATCTCCAACATCCCAGCAGGAGAGACGAACAGGTTCCAGTGTAATGAGATGGAGGGTCGCTATGTTGTTGTGGTGATCCCTGGACAGAACAAGATTCTCACTCTGTGTGAGGTGGAGGTTTACAGCATTCTTACATGTAATTATCTGCAACTATCTTCACTTTTCACATGAAGCGTTAGCTTTATGTAGTTCATACTAGATCAGAACATTCAGTGCCTTCAATCCTATAGGaaatttgtggtcagaactgaaaaagtatgtgcaagcaaggaggccgacaaacctgactcagttacaccagctctgtctggagg

Function

NR:

description
fucolectin-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989256.1 True 692 mRNA 0.45 2 14042284 14044513

Neighbor

gene id symbol gene type direction distance location
LOC110531540 LOC106594400 coding downstream 2555 14033558 ~ 14039729 (-)
LOC110532928 NA coding downstream 11500 14028919 ~ 14030784 (-)
LOC110531549 NA coding downstream 16959 14022650 ~ 14025846 (-)
LOC110531539 NA coding downstream 40224 13988898 ~ 14002060 (-)
LOC110531538 NA coding downstream 55345 13977459 ~ 13987582 (-)
LOC110531545 NA coding upstream 25522 14070035 ~ 14088275 (-)
ndrg2 LOC106577998 coding upstream 109836 14154349 ~ 14191312 (-)
LOC110531544 LOC106577997 coding upstream 168933 14213446 ~ 14223844 (-)
si:ch211-63p21.2 LOC106578003 coding upstream 181272 14225785 ~ 14231094 (-)
LOC118966145 LOC106599223 coding upstream 205021 14249401 ~ 14254157 (-)
LOC110531536 NA non-coding downstream 98562 13917998 ~ 13943754 (-)
G774158 NA non-coding upstream 29842 14074355 ~ 14074597 (-)
G774159 NA non-coding upstream 31452 14075965 ~ 14102816 (-)
G774181 NA non-coding upstream 69772 14114285 ~ 14123191 (-)
LOC110531554 LOC106578008 non-coding upstream 266947 14311455 ~ 14405052 (-)
G774281 NA non-coding upstream 292006 14336519 ~ 14336804 (-)
G773168 NA other downstream 342956 13697179 ~ 13699328 (-)
G773163 NA other downstream 450196 13586326 ~ 13666937 (-)
G772877 LOC106577934 other downstream 1045874 12994269 ~ 12996410 (-)
G771614 NA other downstream 2070930 11970904 ~ 11971354 (-)
G774427 LOC106578022 other upstream 679541 14724054 ~ 14724522 (-)
G774562 LOC106577809 other upstream 1193545 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 1307794 15352307 ~ 15361319 (-)
G774954 NA other upstream 1580689 15625202 ~ 15625920 (-)

Expression


Co-expression Network